Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0243 ATGGCATTTTCTAAGTCGTCTTCTTCCTTCATTCACCCTCAACTCCTCCATATCGTGGCCAAAATGACTCTCTTTGACACCTTCTTGTTCTATATTGTGCACTTCGTGGACAAGCTGGGGGTGTGGCATAGGCTGCCAGTGCTCTTGGGGCTTGCCTACTTGGGAATCAGAAGGCATTTGCACCAACGTTACAATCTGCTGCACGTGGGGGGAGTCAATGGGGGGAGATATGATACTGAAGAGTTCTGTTATAGAACAGCTGATGGAAAATGTAACCACCCCATCGATGATCAGATTGGCAGTCAAGGAACTCTTTTTGGCCGCAACATGCCTCCTTCCACTTCTTCATATCGGTTGCTGGAGCCTCACCCAACAGTTGTGGCCACAAAGCTTTTGGCAAGGAAGAAGTTCATAGATAATGGGAAGCAATTCAACTTGATAGCATGCTCGTGGGTACAGTTTATGATTCATGATTGGATTGATCATATGGAGGACACCCAACAGATAGAGATTAAAGCTCCCAGTGATATTGCCAGTGGGTGCCCATTGAAGTCATTCAAGTTCTTCAAGAGCAAAAGCATTCCCACTGGTTCACCCCACATGGAGGATGGCTTTTTGAATACAAGGACACCTTGGTGGGATGGGAGTGTAATCTATGGGAATAATGATGATGGAATGAGAAGAGTGAGGACATTCAAAGATGGCAAATTGAAGATATCAAATGATGGGCTTCTTGAACATGATGGGAAAGGGATTCCTATCTCTGGTGATGTTAGGAATTGCTGGGCTGGCTTCTCCCTCTTACAAGCCTTATTTGTTAAAGAACACAATGCTGTTTGTGACATGCTAAAAGTACATCACCCTGAATTTGATGATGAGAGACTCTATCGACATGCAAGACTGGTGACTTCAGCTGTCATTGCTAAAATACATACCATTGATTGGACTGTTGAGCTCTTAAAAACCGATACTCTTTTGGCTGGGATGAGAATCAACTGGTATGGATTTATGGGGAAGAAATTCAAGGATTCATTTGGACATATTTTGGGGCCAATACTAAGTGGATTGGTTGGTCTTAAGAAGCCAAGAGACCACGGAGTTCCTTATTCCCTAACTGAAGAGTTTGTTAGTGTATACAGAATGCATGCTCTTTTACCCGATGAACTCCATATCCGCGACACAAACTCTAGCAACACTGCTTCAGAAGGCGAATGCCCGCCTCTCATAGAAGAGTAA 1236 0.4409 MAFSKSSSSFIHPQLLHIVAKMTLFDTFLFYIVHFVDKLGVWHRLPVLLGLAYLGIRRHLHQRYNLLHVGGVNGGRYDTEEFCYRTADGKCNHPIDDQIGSQGTLFGRNMPPSTSSYRLLEPHPTVVATKLLARKKFIDNGKQFNLIACSWVQFMIHDWIDHMEDTQQIEIKAPSDIASGCPLKSFKFFKSKSIPTGSPHMEDGFLNTRTPWWDGSVIYGNNDDGMRRVRTFKDGKLKISNDGLLEHDGKGIPISGDVRNCWAGFSLLQALFVKEHNAVCDMLKVHHPEFDDERLYRHARLVTSAVIAKIHTIDWTVELLKTDTLLAGMRINWYGFMGKKFKDSFGHILGPILSGLVGLKKPRDHGVPYSLTEEFVSVYRMHALLPDELHIRDTNSSNTASEGECPPLIEE* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0243 411 SUPERFAMILY Heme-dependent peroxidases 81 403 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vvi17g0243 411 PRINTS Animal haem peroxidase signature 295 321 IPR019791 -
Vvi17g0243 411 PRINTS Animal haem peroxidase signature 147 162 IPR019791 -
Vvi17g0243 411 PRINTS Animal haem peroxidase signature 270 290 IPR019791 -
Vvi17g0243 411 PANTHER PROSTAGLANDIN G/H SYNTHASE 7 398 - -
Vvi17g0243 411 ProSiteProfiles Animal heme peroxidase superfamily profile. 75 411 IPR019791 -
Vvi17g0243 411 Pfam Animal haem peroxidase 84 398 IPR019791 -
Vvi17g0243 411 Gene3D Haem peroxidase domain superfamily, animal type 2 410 IPR037120 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0243 Vvi-Chr17 2507238 2509659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0243 10 411 Acyl Lipid Metabolism Gene Families AT3G01420 63.614 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0243 K10529 - vvi:100260995 846.269