Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0241 ATGAACAAGAAGGGAGCATGGGCGGTGCTGTGGGTGATCGTTGTAATCCAATGCGTCGCAGATGCAGCGGAGCACAATGAGGAGTCGCTGATATTCAACACCCATGGACTGAGCAGAGAGAGCTTCCCCAAGGGCTTCGTCTTCGGCACCGCCACGTCAGCTTACCAGGTCGAGGGCATGGCTGACAAGGACGGCCGAGGACCAAGCATTTGGGATGTCTTCATTCGAAAACCCGGGATTGTGGCGAATAATGGCACTGGAGAGGTGGCGGTTGACCAGTATCACCGGTACAAGGAAGATATAGACCTGATGAAGAGTCTTAATTTTGAAGCATACCGCTTCTCAATCTCATGGTCCAGGATTTTCCCAGAGGGAACTGGGAAAGTGAATTGGAAGGGAGTTGCTTACTACAATAGACTGATCAACTACCTGCTCAAAAAAGGCATTACCCCATATGCAAATCTCTATCACTATGACCTTCCTTTGGCACTTGAGAAGAAATACAATGGGTTATTGAGTTACAGAGTAGTGAAAGATTTTGCGGATTATGCTGACTTTTGCTTCAAGATGTTTGGAGACAGAGTGAAGAATTGGATGACATTTAATGAGCCAAGAGTGGTGGCTGCTCTTGGCTATGATAATGGTTTCTTTGCTCCAGGGAGGTGCTCCAAGGAGTATGGAAACTGTACTGCTGGGAACTCTGGAACAGAGCCTTACATTGTGGCACATCATTTGATTTTGTCCCATGCAGCTGCCGTTCAGAGATACAGGGAGAAATATCAAAAAGAACAAAAGGGGAGGATTGGAATTCTCTTGGATTTTGTTTGGTATGAGCCTCTTACAAGATCAAAGGCTGACAACCTAGCAGCTCAAAGATCCAGAGACTTTCATGTTGGATGGTTTATTCACCCCATTGTATATGGAGAGTATCCGAGAACAATGCAAGAGATTGTTGGAGATAGACTGCCCAAGTTCACAAAAGCGGAGGTGAAGATGGTGAAAGGATCGATGGATTTCGTGGGAATCAACCAGTATACAGCCTACTACATGTATGATAAGCCGAAACCCAAAGTCCCTGGCTACCAGGAGGACTGGCATGCTGGATTTGCTTATGAAAAGCATGGAGTGCCAATTGGTCCAAGGGCATATTCTAGCTGGCTCTACAAAGTTCCTTGGGGTCTTTACAAAGCTGTGACCTACATAAAAGAGCGATATGGAAACCCCACTGTGATTTTGTCAGAAAATGGCATGGATGATCCGGGTAATGTCACCCTTTCTCAGGGATTGCATGACACAAAAAGGGTCAACTTCTACACAAACTATTTGACTGAGCTAAAGAAGGCAATCGATGATGGAGCAAATGTAATTGGCTACTTTGCATGGTCATTGCTGGACAACTTTGAATGGAGACTAGGATACACTTCAAGGTTCGGCATTGTCTACGTTGACTGGAGGACCCTCAAGAGGTATCCTAAAATGTCTGCCAAGTGGTTCAAGCAGATGCTTGCTCAGAAGGGGCATTAG 1524 0.4587 MNKKGAWAVLWVIVVIQCVADAAEHNEESLIFNTHGLSRESFPKGFVFGTATSAYQVEGMADKDGRGPSIWDVFIRKPGIVANNGTGEVAVDQYHRYKEDIDLMKSLNFEAYRFSISWSRIFPEGTGKVNWKGVAYYNRLINYLLKKGITPYANLYHYDLPLALEKKYNGLLSYRVVKDFADYADFCFKMFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKEYGNCTAGNSGTEPYIVAHHLILSHAAAVQRYREKYQKEQKGRIGILLDFVWYEPLTRSKADNLAAQRSRDFHVGWFIHPIVYGEYPRTMQEIVGDRLPKFTKAEVKMVKGSMDFVGINQYTAYYMYDKPKPKVPGYQEDWHAGFAYEKHGVPIGPRAYSSWLYKVPWGLYKAVTYIKERYGNPTVILSENGMDDPGNVTLSQGLHDTKRVNFYTNYLTELKKAIDDGANVIGYFAWSLLDNFEWRLGYTSRFGIVYVDWRTLKRYPKMSAKWFKQMLAQKGH* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0241 507 FunFam Beta-glucosidase 7 23 505 - -
Vvi17g0241 507 Pfam Glycosyl hydrolase family 1 39 506 IPR001360 GO:0004553|GO:0005975
Vvi17g0241 507 PANTHER GLYCOSYL HYDROLASE 41 505 IPR001360 GO:0004553|GO:0005975
Vvi17g0241 507 Gene3D Glycosidases 24 506 - -
Vvi17g0241 507 PRINTS Glycosyl hydrolase family 1 signature 452 469 IPR001360 GO:0004553|GO:0005975
Vvi17g0241 507 PRINTS Glycosyl hydrolase family 1 signature 431 442 IPR001360 GO:0004553|GO:0005975
Vvi17g0241 507 PRINTS Glycosyl hydrolase family 1 signature 410 418 IPR001360 GO:0004553|GO:0005975
Vvi17g0241 507 PRINTS Glycosyl hydrolase family 1 signature 476 488 IPR001360 GO:0004553|GO:0005975
Vvi17g0241 507 PRINTS Glycosyl hydrolase family 1 signature 336 350 IPR001360 GO:0004553|GO:0005975
Vvi17g0241 507 SUPERFAMILY (Trans)glycosidases 32 503 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0241 Vvi-Chr17 2495986 2498620 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0241 22 504 Glycoside Hydrolase AT3G18080 77.984 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0241 K05350 - vvi:100255914 1069.3