Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0225 ATGGGAACCGTTATCGATTCCCATTTCTTAGCTCTCACAGCCATTGTCACTGTGGGTTATCAGTTTTTGTTCTTCATTATCACAGCTCTTCTCAAGTTCGATAAAGTCACTGACTTCGCTGGAAGCACGAACTTTGTTATACTTGCTGTGTTAACTTTGGTCTTGAAAGGAACGTGGCATTTTAGACAGGTAGTTTTGACCTTGCTTGTAGTAATATGGGGCCTTCGACTGGGAATTTTTCTGTTAATGAGGATTTTGCAATGGGGTGAGGATAGGCGCTTTGATGAAATGCGCAGTAATTTGGGGAAATTGGCAGTTTTCTGGACATTTCAGGCTGTCTGGGTATGGACTGTGAGTTTACCTGTGACAATAGTTAATGCTAGTGGCAGAGATCCATCTCTTCAAGCTGCAGACATAATTGGTTGGATTATGTGGTCAGTGGGAATTACAATTGAAGCTTCGGCGGATCAGCAAAAGTTGTCATTCAAGAATTCCCCAGAGAATAGAGGAAAGTGGTGTAATGTTGGAGTCTGGAAATACACCCGTCATCCAAACTATTTTGGTGAGATTTTGCTTTGGTGGGGAATCTTTGTTGCTTCCACCCCTGTCCTGGAAGGTGCAGAATGGCTTGTAATCCTTGGACCAATCTTCCTCACATTGTTGCTTCTTTTTGTCAGTGGCATACCATTGCTTGAGGAATCAGCAGATAAGAAGTTTGGCAATGTGGCTGGATACAGGCTCTATAAAAGCACAACTAGCCCTCTTGTTCCACTCCCCCCAGTGGTGTATGGGAACTTGCCCTCATGGTTCAAAACAACATTCCTCCTTGAGTTTCCTTTCTACAGTCGAAATCTTCCTCAAGAAGGACAAAACTGA 876 0.4338 MGTVIDSHFLALTAIVTVGYQFLFFIITALLKFDKVTDFAGSTNFVILAVLTLVLKGTWHFRQVVLTLLVVIWGLRLGIFLLMRILQWGEDRRFDEMRSNLGKLAVFWTFQAVWVWTVSLPVTIVNASGRDPSLQAADIIGWIMWSVGITIEASADQQKLSFKNSPENRGKWCNVGVWKYTRHPNYFGEILLWWGIFVASTPVLEGAEWLVILGPIFLTLLLLFVSGIPLLEESADKKFGNVAGYRLYKSTTSPLVPLPPVVYGNLPSWFKTTFLLEFPFYSRNLPQEGQN* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0225 291 Gene3D - 59 258 - -
Vvi17g0225 291 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 141 209 IPR001104 GO:0006629|GO:0016627
Vvi17g0225 291 PANTHER 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE 4 283 IPR010721 -
Vvi17g0225 291 FunFam 3-oxo-5-alpha-steroid 4-dehydrogenase (DUF1295) 59 259 - -
Vvi17g0225 291 Pfam Protein of unknown function (DUF1295) 24 252 IPR010721 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0225 Vvi-Chr17 2304660 2316132 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0225 - - vvi:100853969 573.933