Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0224 ATGGCTGGATGGATATCATCGAAGCTCAAAGTTGCAGAAACCTTACTTCAACAGATCGATCAGCAAGCGGCAGAGTCTCTGGGGAAGAACGAGAGGCCGCAATCAGATGAACTTGATGAGAAGATTCCCGCAAAATCTGGAGGGGTTCTGCCTCTGAAAGATCAGCTGAAGAAAAAAACACAAGAAAGCTATGATTTCCAGGGGAAATTGCACAGCGATCCCAATGTCAATGTGCTTAATAGTCAAGATCGGGACAAAGAGGTTACGAGTCCATCAAAACCTTTTTCGAGCCCTAGGTCTAATCTTACGGACAGTGACTGGACTGAACTCCTCAGCACGCCCAATCAAGAGACCCCATTTGGGGCGAATCGGACTAATGGAACGTCTGGGATTCGTGGTCTGCGGAAAGATGGGCGGAGGCAGGCGAGTTCAGGTTTGAATTTGTCAGGACTGGAAGCGAAGAGGAATTATAGGAGTAATAATAGTGCTTCGAAGCCTCAGCGAAGGTCTGATGTTGGACCAGGAAATAGAGAGAATGCAGGTGGATTGGATAGGAAATTGAGTGATGAGAAAGAGTTGGGACGTTCAGACTCAGTGGATAGAACATCGAGTGCTGAGTTGCGAAATGATGGTAAGTATGTGGAAGCACAAGAATCGGAACTTGTGATGGTGGTGGGAGATGACTCGAATCCAGAAAGGAGTGTTGTTAAAGATAGTGTTGAGGATGGAGGGAGGATTATATCTAAGGGGCATTCGGTTGATAAAAATCATCATTTGGAAACAAAATTGGTGGCTGAAAGAGGTGATAGGATACCTGATATGAATAAGGCAATCAATGATGAGCAGAAAAGGTTAGGGCAGTCAAATGCTGGCTTGGGGAGTTCAGTCTCTCTTGAGTTGAAAGGAACTACTTCTGTAAGTGATGAAAGGTCTGATTCAGATACAGACTCTGCTTCCTCGTCTGACTCAGAAAGTGAACGCATCAGGGAGGAAAGGAAAAGGAGAAGAAAGCAGATTCTGGCCGAGAAACAGGCAGCTAAAGCTGTTGCGGCAATCAAAGAACGCGAGAATATGGTTGCAAGGTTGGAGGGGGAGAAAGAAAGCTTAGAGAAAATACTTGAAGAGAGAGAGAAACAGCAAGCACAAGAGGCTTCAGAACTCCAGACAACAATGATGGAAACAATGGAAGCTGTTGAGTTAGAGAAGCAGAAACATAATAATACTAGAATGGAAGCCCTTGCAAGATTGGCTAAGCTTGAGACTGTCAATGCTGAACTTGCAAGATCCCTGGCTACTGCCCAATGGAATCTTGAAGTAGAGGTTAATCGGGTGGCAGAAATCCGTCAACAAATTGAATTGAAAGAAGTTGCCCTTGAAGAACAAAGAAGGAGGATCCCCAATGCTCATCAGATGGGAACCTCTCTAAGCCATTTGGTGGCTGCAAAAGGAGTTGAATTTGAGAAAGAGATACTTGAGGCGGAGTACTCTTTCATTACTGACAAAATTGGATGGTTGCAAGACAAGGCAAAGAAGCTGGAAGCAAACATTGAAATGACGCGGAAGGAGATGGAGAGTCCAACAGTAGTAGAAGTTGAGCTCAAAAGGAGGCTATTCCAGCTGACTGACCATTTAATTCAGAAACAAGCCCAGGTGGAGGCTCTTTCCTCGGAGAAGGCAACGCTACTGTTTAGAATCGAGGCTGTTTCAAGATTGCTGGAAGAAAACAAGTTGTTACTCTTGTCGAGGGATGACCTGGAGTCGGGATCATGGGATATTTCTGATTCAAAGCTGAAGCCTCTATTGGAAGACAGAATTCGATCTGGTGGGCAGCACTTCTGGTCGTTGATGCGGCAGTTGGACACAATTTTTTCTGCAGGTGCTGTGTTTCTGAGGAGGAATTCAACGGCTAAATGGTGGGCTTTGTTTTACCTTGTAAGCCTTCATTTGTGGGTTATTTATATACTTACGTCACACTCCGAAACAACAGTGGAGACGAGATCAGGTGCGGTCATGTCCCTGGAGAATATCAATAGCACAGGTGGTGTGTGA 2049 0.4519 MAGWISSKLKVAETLLQQIDQQAAESLGKNERPQSDELDEKIPAKSGGVLPLKDQLKKKTQESYDFQGKLHSDPNVNVLNSQDRDKEVTSPSKPFSSPRSNLTDSDWTELLSTPNQETPFGANRTNGTSGIRGLRKDGRRQASSGLNLSGLEAKRNYRSNNSASKPQRRSDVGPGNRENAGGLDRKLSDEKELGRSDSVDRTSSAELRNDGKYVEAQESELVMVVGDDSNPERSVVKDSVEDGGRIISKGHSVDKNHHLETKLVAERGDRIPDMNKAINDEQKRLGQSNAGLGSSVSLELKGTTSVSDERSDSDTDSASSSDSESERIREERKRRRKQILAEKQAAKAVAAIKERENMVARLEGEKESLEKILEEREKQQAQEASELQTTMMETMEAVELEKQKHNNTRMEALARLAKLETVNAELARSLATAQWNLEVEVNRVAEIRQQIELKEVALEEQRRRIPNAHQMGTSLSHLVAAKGVEFEKEILEAEYSFITDKIGWLQDKAKKLEANIEMTRKEMESPTVVEVELKRRLFQLTDHLIQKQAQVEALSSEKATLLFRIEAVSRLLEENKLLLLSRDDLESGSWDISDSKLKPLLEDRIRSGGQHFWSLMRQLDTIFSAGAVFLRRNSTAKWWALFYLVSLHLWVIYILTSHSETTVETRSGAVMSLENINSTGGV* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0224 682 MobiDBLite consensus disorder prediction 281 304 - -
Vvi17g0224 682 Coils Coil 395 415 - -
Vvi17g0224 682 MobiDBLite consensus disorder prediction 231 280 - -
Vvi17g0224 682 MobiDBLite consensus disorder prediction 142 169 - -
Vvi17g0224 682 Coils Coil 502 522 - -
Vvi17g0224 682 Pfam Golgin subfamily A member 5 505 656 IPR019177 GO:0007030
Vvi17g0224 682 MobiDBLite consensus disorder prediction 67 130 - -
Vvi17g0224 682 MobiDBLite consensus disorder prediction 24 341 - -
Vvi17g0224 682 MobiDBLite consensus disorder prediction 305 341 - -
Vvi17g0224 682 PANTHER GOLGIN-84 1 665 IPR019177 GO:0007030
Vvi17g0224 682 Coils Coil 352 386 - -
Vvi17g0224 682 Coils Coil 444 464 - -
Vvi17g0224 682 MobiDBLite consensus disorder prediction 182 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0224 Vvi-Chr17 2288304 2303829 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0224 - - vvi:100266441 1246.11