Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0217 ATGTTAAGGACAGCAAGCAACATTGCAGTTGTGAAAGAGGTGGAAACTATAATGGACCCAGCAGCCTTCTCTGCAGTGCGATTTGCTGTGTCAGCCATCCCATTCCTACCCTTTGTTTTTCGGGCACGAGGTGATGTTCAGACCCGTAATGCTGGGCTAGAGTTGGGACTGTGGATCAGCTTAGGCTACCTTGCTGAGGCACTCGGACTACTCACATCTGAAGCTGGGCGAGCATCCTTTTTTTCGTTCATTACAGTTATTGTGGTACCTCTTCTTGATTCAATGTTGGGGGCAATAGTACCTGCCAGAACCTGGTTTGGAGTTCTCATGTCTGTACTAGGGGTTGCTATGCTGGAATGCAGTGGATCTCCTCCTAACGTTGGAGATCTTTTGAACTTCCTAAGTGCAATATTTTTCGGTATTCACATCCTTCGAACCGAACAATTGTCGAGAAGCACAAAGAAAGAGAATTTCCTGCCTCTACTTGGATATGAGGTGTGTGTTGTTGCTCTGTTATCTACATTCTGGTATGTAATTGGAGGATGGTTTGATGGAATTCAAGATTCTGACCAAGCATCCTGGACATGGGCAGTGCTGTGGGATTCTATGGTTGCGTTTCCATGGATTCCTGCACTTTATACTGGTGTATTCTCAACTGGATTATGCTTATGGCTGGAGATTGGTGCAATGCGCGATGTTTCAGCAACAGAAACAGCCATAATTTACGGCCTAGAACCGCTATGGGGAGCTGGTTTTGCATGGTTTCTCCTGGGTGAGAGATGGGGCACAACCGGATGGATCGGAGCTGCTCTCTTACTGGGTGGAAGCTTAACAGTACAAATGTTTGGATCTTCATCTTCCAGTGAATCAATAGGAGTTGAAGATGGGGATAAGGAAGTAGATATTCTTGTTTCGGAGAAGCAAAAGCTGCAGACTGGTCTCTCTGCTTCACCTGTAGTTATTATCAGCTCCAGAAAGGATGTAATTGACATGTTAAAGAAGTGA 1005 0.4547 MLRTASNIAVVKEVETIMDPAAFSAVRFAVSAIPFLPFVFRARGDVQTRNAGLELGLWISLGYLAEALGLLTSEAGRASFFSFITVIVVPLLDSMLGAIVPARTWFGVLMSVLGVAMLECSGSPPNVGDLLNFLSAIFFGIHILRTEQLSRSTKKENFLPLLGYEVCVVALLSTFWYVIGGWFDGIQDSDQASWTWAVLWDSMVAFPWIPALYTGVFSTGLCLWLEIGAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWGTTGWIGAALLLGGSLTVQMFGSSSSSESIGVEDGDKEVDILVSEKQKLQTGLSASPVVIISSRKDVIDMLKK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0217 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 195 283 - -
Vvi17g0217 334 Pfam EamA-like transporter family 128 278 IPR000620 GO:0016020
Vvi17g0217 334 Pfam EamA-like transporter family 5 118 IPR000620 GO:0016020
Vvi17g0217 334 SUPERFAMILY Multidrug resistance efflux transporter EmrE 27 121 - -
Vvi17g0217 334 PANTHER OS03G0707200 PROTEIN-RELATED 5 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0217 Vvi-Chr17 2193765 2195938 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0217 - - vvi:100247357 648.662