Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0216 ATGGCCGCTCAAGTAGGACAAGAGCGTGAGATCCAGAAGAACTACTGGGCGGAGCACTCGGCGGACCTCACTGTTGAGGCGATGATGCTCGATTCCAAAGCCGCTGACCTTGACAAGGAAGAGAGACCTGAAGTGCTTTCACTACTCCCACCATTTGAAGGGAAATCAGTTTTGGAACTAGGAGCAGGTATTGGTCGTTTTACTGGTGAATTAGCTCAGAAAGCTGGCCAGGTTATCTCTTTGGACTTTATTGAAAGTGTTATAAAAAAGAATGAAAGCATAAATGGGCACTACAAGAATGTCAAGTTTATGTGTGCTGATGTAGCATCTCCAGAGCTGAATTTTTCAGCAGAATCAGTGGACTTGATATTCTCTAATTGGCTTCTGATGTATCTTTCTGATAAAGAGGTTGAGGAACTGGTTGAAAGAATGGTCAAATGGTTAAAGGTTGGAGGCTTTATTTTCTTCCGAGAGTCGTGTTTTCATCAGTCTGGAGATTCTAAGCGAAAAGTAAATCCGACCCACTATCGGGAACCCAGATTTTATACAAAGGTGTTTAAAGAATGCCAAACACATGATTGTTCCGGGAATCTCTATGAACTATCTCTTGTTGGCTGTAAATGCATTGGAGCTTATGTGAGAAACAAAAAAAATCAAAATCAGATTTGCTGGTTATGGCAAAAAGTCAGCTCACAGGATGATAAGGGCTTCCAGAAGTTCTTGGATAATGTTCAGTATAAATGTAATGGCATATTACGCTATGAACGTGTCTTTGGAGAAGGCTTTGTAAGCACAGGAGGGATTGAGACAACAAAAGAATTTGTGGGAAAACTGGACCTTAAACCTGGCCAGAAGGTCCTAGATGTGGGCTGTGGCATTGGAGGAGGTGACTTCTATATGGCAGAGAACTTTGATGTTGAGGTTGTTGGCATTGACCTCTCCATAAATATGGTTTCTTTTGCTCTTGAACGTGCGATTGGACTCAAGTGCTCAGTTGAATTCGAGGTAGCTGACTGCACCAAGAAATCATATCCTGACAACACATTTGATGTGATCTACAGCCGTGACACCATTCTTCACATTCAAGACAAACCTGCACTATTTAAATCCTTTTTCAAGTGGCTGAAGCCAGGAGGTAAAGTTCTGATTAGTGATTACTGCAAAAGAGCTGGACCTCCATCATCAGAATTTTCAGAATATATTAAACAAAGAGGGTATGATCTTCACGATGTGGAAGCGTATGGTGAGATGCTTAGAGATGCTGGTTTCATTGAGGTCATTGCAGAGGATAGAACTGATCAGGTTGGTATACACCTGCATTTTTTTTTTCCATCTATGAGTATGCTATGCACGGTATCATGTGTTTCTCAATTTGAAACAATGGTTTTGTTGTGCACAGTTCCTACAAGTTCTGCAGAGGGAGTTAAATGCTGTTGA 1437 0.4148 MAAQVGQEREIQKNYWAEHSADLTVEAMMLDSKAADLDKEERPEVLSLLPPFEGKSVLELGAGIGRFTGELAQKAGQVISLDFIESVIKKNESINGHYKNVKFMCADVASPELNFSAESVDLIFSNWLLMYLSDKEVEELVERMVKWLKVGGFIFFRESCFHQSGDSKRKVNPTHYREPRFYTKVFKECQTHDCSGNLYELSLVGCKCIGAYVRNKKNQNQICWLWQKVSSQDDKGFQKFLDNVQYKCNGILRYERVFGEGFVSTGGIETTKEFVGKLDLKPGQKVLDVGCGIGGGDFYMAENFDVEVVGIDLSINMVSFALERAIGLKCSVEFEVADCTKKSYPDNTFDVIYSRDTILHIQDKPALFKSFFKWLKPGGKVLISDYCKRAGPPSSEFSEYIKQRGYDLHDVEAYGEMLRDAGFIEVIAEDRTDQVGIHLHFFFPSMSMLCTVSCVSQFETMVLLCTVPTSSAEGVKCC* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0216 478 Pfam Methyltransferase domain 282 387 IPR025714 -
Vvi17g0216 478 CDD AdoMet_MTases 285 386 - -
Vvi17g0216 478 Gene3D Vaccinia Virus protein VP39 9 240 IPR029063 -
Vvi17g0216 478 PANTHER PHOSPHOETHANOLAMINE METHYLTRANSFERASE 6 435 - -
Vvi17g0216 478 Pfam Methyltransferase domain 58 156 IPR013216 GO:0008168
Vvi17g0216 478 ProSiteProfiles Phosphoethanolamine N-methyltransferase (PEAMT) (EC 2.1.1.103) family profile. 1 475 IPR025771 GO:0000234|GO:0006656
Vvi17g0216 478 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 15 207 IPR029063 -
Vvi17g0216 478 Gene3D Vaccinia Virus protein VP39 241 442 IPR029063 -
Vvi17g0216 478 CDD AdoMet_MTases 57 156 - -
Vvi17g0216 478 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 253 438 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0216 Vvi-Chr17 2183684 2192944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0216 1 434 Acyl Lipid Metabolism Gene Families AT3G18000 83.641 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0216 K05929 - vvi:100254279 887.871