Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0206 ATGTTATACCTTCTAAGCCTCTACGAAAACTATCTTTTAGGTCCAATCCCTACGTCATTAGGAAACTTGAAGTCTCTTGTTGATCCAGAACTTTCAGAAAACCAACTCAATGGTTCCCTTCCTACTTCACTAGGTAATCTGACCAACTTAGAAATTTTATTCCTCCGTGATAACAAACTTTCTGGTTACATTCCTCGAGAAATTGGGAAACTTCATAAGTTGGTTGTGCTAGAAATCAACACAAACCAGCTGTCTGGCTCTTTTCCGGAAGGCATTTGCCAATGTGGATCTCTGGTGCGCTTTACAATGGCCGGGAACAATATTACAGGGAGCATACCAGAAGATTTTGGAATCTCAACTGATCTAACCTTCCTTGATCTTTCTTCAAAACATTTGGTTGGACAATTTCTGAAAAAAAAAAAGGGAAGTTTAACTTCTCTCCTTGATCATCTCGACTTATCAGCAAACCGATTAAATGGGTCAATACCAGCGAACTTGGGTGACTGCTCGAACTTGTATTACTTGAACCTGAGCAATAACAGGCTTAGCCACAGAATTCCTGCTCAGATGGGTAAGCTGAGGTTGCAACCCTGCAAAAAGGGTTCTGGAGTAGGCCAACCACCTAGAGAGAACTCCAGAAATCGAAGAAGGTGA 654 0.4144 MLYLLSLYENYLLGPIPTSLGNLKSLVDPELSENQLNGSLPTSLGNLTNLEILFLRDNKLSGYIPREIGKLHKLVVLEINTNQLSGSFPEGICQCGSLVRFTMAGNNITGSIPEDFGISTDLTFLDLSSKHLVGQFLKKKKGSLTSLLDHLDLSANRLNGSIPANLGDCSNLYYLNLSNNRLSHRIPAQMGKLRLQPCKKGSGVGQPPRENSRNRRR* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0206 217 Pfam Leucine Rich Repeat 171 188 IPR001611 GO:0005515
Vvi17g0206 217 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 82 194 - -
Vvi17g0206 217 SUPERFAMILY L domain-like 3 192 - -
Vvi17g0206 217 MobiDBLite consensus disorder prediction 196 217 - -
Vvi17g0206 217 Gene3D Ribonuclease Inhibitor 1 196 IPR032675 -
Vvi17g0206 217 PRINTS Leucine-rich repeat signature 169 182 - -
Vvi17g0206 217 PRINTS Leucine-rich repeat signature 148 161 - -
Vvi17g0206 217 FunFam Piriformospora indica-insensitive protein 2 1 88 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0206 2 194 Receptor kinase-like Gene Family AT4G08850 38.860 6.20e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0206 - - vvi:100243949 199.904