Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0205 ATGATCCAGAAAACCCAGAAAATTCCAAACCCACGATTCGCCATGAGAAGAGCTTCAGCTCTCGCCTCCTCCGCTCTCTCCCGAGCTCTCCTCTCCGCCCAAGACGGCGCCACCACCACTGCCGTCATCCAACACCGGATATTCCAGGCGGCTCTATACGGAACCACCACCAGCGCCGCTGCTCAATCCACTCGCCGGAGGTGGTACTCTACGGCTCTCTATTCTCTCTCCGGCGGTTCAGCTAAAACCGTGTCTCTTTCCATCGCCGGAGCTCTGTTCTCCGCTGCCGCCGCCACCTCGCTTTCCGAAGAGGTGTTAGCCAAGGAGCCACCGTCCCCGGATCTTGTCCCTAAGGACGTTGTTCTTTATCAGTACGAAGCTTGCCCTTTCTGCAATAAGGTCAAAGCTTTCTTGGACTATTATGATATACCATACAAAGTTGTGGAGGTCAATCCGCTCAGTAAAAGAGAGATCAAATGGTCTGATTACAAGAAGGTGCCTATACTGATGGTGAATGATGAGCAGCTAGTGGATTCATCAGCTATAATTGACAAGATGAGCGACAAGATTCTTCCAAAAAAATCTGCTGATTCAGCCTCTGATGATGAAGAGAGAAAGTGGCGGCAGTGGGTTGATAATCACTTGGTTCATGTATTATCACCAAACATATACCGAAGTACTTCAGAGGCTCTTGAGTCCTTTGACTATATCACTAGCAATGGTAATTTTAGCTTCACAGAAAAATTAACTGTGAAGTATGCTGGAGCTGCAGCTATGTATTTTGTGTCCAAGAAATTGAAGAAGAGACATAATATTACTGATGAACGTGCAGCATTGTATGAAGCTGCAGAAACATGGGTTGATGGTCTCAATGGCAGGGAGTTTCTTGGTGGCTCCAAACCTAATTTAGCTGACCTTGCTGTCTTTGGGGTGTTGAGACCCATCCGTTACCTGAGGTCTGGTAGAGATATGGTGGAAAACACTCGTATTGGTGAATGGTACACAAGAATGGAGAATGCTGTGGGGGAGTCATCAAGGATTAAAGCCTAG 1050 0.4752 MIQKTQKIPNPRFAMRRASALASSALSRALLSAQDGATTTAVIQHRIFQAALYGTTTSAAAQSTRRRWYSTALYSLSGGSAKTVSLSIAGALFSAAAATSLSEEVLAKEPPSPDLVPKDVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPLSKREIKWSDYKKVPILMVNDEQLVDSSAIIDKMSDKILPKKSADSASDDEERKWRQWVDNHLVHVLSPNIYRSTSEALESFDYITSNGNFSFTEKLTVKYAGAAAMYFVSKKLKKRHNITDERAALYEAAETWVDGLNGREFLGGSKPNLADLAVFGVLRPIRYLRSGRDMVENTRIGEWYTRMENAVGESSRIKA* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0205 349 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 118 194 IPR004045 -
Vvi17g0205 349 Gene3D - 197 348 - -
Vvi17g0205 349 Pfam Glutathione S-transferase, N-terminal domain 122 185 IPR004045 -
Vvi17g0205 349 SFLD Prostaglandin E synthase like.1 42 348 IPR034334 GO:0050220
Vvi17g0205 349 Gene3D Glutaredoxin 115 192 - -
Vvi17g0205 349 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 20 348 - -
Vvi17g0205 349 SUPERFAMILY Thioredoxin-like 119 216 IPR036249 -
Vvi17g0205 349 ProSitePatterns Glutaredoxin active site. 122 138 IPR011767 -
Vvi17g0205 349 SUPERFAMILY GST C-terminal domain-like 197 341 IPR036282 -
Vvi17g0205 349 CDD GST_C_mPGES2 199 343 IPR034335 -
Vvi17g0205 349 SFLD Prostaglandin E synthase like 42 348 - -
Vvi17g0205 349 ProSiteProfiles Glutaredoxin domain profile. 108 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0205 Vvi-Chr17 2017731 2033537 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0205 K05309 - vvi:100266342 634.795