Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0200 ATGTCAATAGAGATCAAACTTTTCCGACCTAACCGCATCTATTTTCCCGCCGAACCTCTTGAAGGCAAAATCATCCTGAAGTCACCCTCTTCAATTTCTCACTATGGGATTCGCCTCACTCTCGATGGATCCGTCAACCGACAGGTTCGGGGAGGCTCAGCAGGAGCAATTGAGGCCTTGTATGGTGCTGTCAAGCCTATACGCATTGTGAACAAGAGTGTTGAGATTAGACCTGCCGGAAAGATTGGTTCAGGTACAACTGAGATACCATTTTCTGTAATTCTGAGGCAGCAAGGAGATGATAGATTTTATGAAACCTTCCATGGGGCAAATATCAGCATCCAGTATCTGGTAACTGTAGATGTAATGAGAGGATACCTATATAAATCATTATCTGCTACAATGGAGTTTATAATTGACAGTGATAAAGTTCCTCCTGAAATGGTTATCTTCTACATCACTCAGGACACACAAAGACATCCACTGCTTCCTGAGTTAAGATCAGGTGGATTTCGAGTGACTGGAAAAGTGTCCTCTCAGTGTTCTTTGTTAGATCCTATCAGCGGTGAGCTAATAGTAGAAGCATCTGCAGTTCCCATTCATTCCATTGATCTTCAACTGCACCGTGTAGAGTCAATTCTTGTTGGAGAGAAGATTGTAACTGAAAGCTCTTTGATTCAGACAACGCAGATAGCAGATGGAGATGTGTGTCGTAGAGTGACCATTCCAATCTATGTTATTCTTCCTCGTCTTTTGACTTGTCCGACAGTCTTAGCTGGTCCATTTTCAATTGAGTTCAAAATCTCCATCGTCATTACCTTCGAGTCAGAACTGGTGAAACTGCATCCAAAATCCGATCCCAAAACTCCCAGACTCTGGCTGGCAATGGAAACTATACCACTGGAACTGATTCGAACAAAGTGA 924 0.4297 MSIEIKLFRPNRIYFPAEPLEGKIILKSPSSISHYGIRLTLDGSVNRQVRGGSAGAIEALYGAVKPIRIVNKSVEIRPAGKIGSGTTEIPFSVILRQQGDDRFYETFHGANISIQYLVTVDVMRGYLYKSLSATMEFIIDSDKVPPEMVIFYITQDTQRHPLLPELRSGGFRVTGKVSSQCSLLDPISGELIVEASAVPIHSIDLQLHRVESILVGEKIVTESSLIQTTQIADGDVCRRVTIPIYVILPRLLTCPTVLAGPFSIEFKISIVITFESELVKLHPKSDPKTPRLWLAMETIPLELIRTK* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0200 307 Gene3D - 174 282 IPR014752 -
Vvi17g0200 307 FunFam Vacuolar protein sorting-associated protein 26 174 281 - -
Vvi17g0200 307 Pfam Vacuolar protein sorting-associated protein 26 11 275 IPR028934 GO:0006886
Vvi17g0200 307 FunFam Down syndrome critical region protein 3 1 142 - -
Vvi17g0200 307 Gene3D - 3 141 IPR014752 -
Vvi17g0200 307 PANTHER VACUOLAR PROTEIN SORTING 26 RELATED 12 279 IPR028934 GO:0006886
Vvi17g0200 307 SUPERFAMILY E set domains 3 142 IPR014756 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0200 K25730 - vvi:100259471 593.193