Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0199 ATGTTTGGGTTCTGGGAATTTGAAGGAAACTTGGCTGATGTTGTTCTTGGGTGCGATTCTCTGGAACCATATCTGAAAGGTGATGTGCCCTATTTTGGGTGCATTGTTGGTAGAGTTGCAAATAGAATCAAAGATGGGAAGTTTACTCTCAATGGGATTGAATACCAATTGCCCATCAACAAGCCCCCAAACAGTCTCCACGGTGGGCACAAGGGCTTTAGCAAGAAGGTCTGGGAGGTGGCTGAAAGGAAAGAAGGCAAAACCCCATCCATCACTTTCAAGTACCATAGTCACGACGGGGAAGAAGGTTACCCAGGAGATGTTTCCGTAACTGCAACTTACACTCTTACTTCGAGCACAACAATGAGGCTTGACATGGAAGCTGTGCCTGAGAACAAGCCCACTCCAATCAACTTAGCTCAACACACATACTGGAACTTAGCAGGCCACAGCTCCGGCAACATACTTGACCACTCCATTCAGATATGGGGATCTCATATCACTCCTGTGGATCAGAACACAGTCCCAACCGGTGAAATCACGCCAGTGAAAGCCACCCCATTTGATTTCACGACTGAGAAGAAGATTGGTACCTCAATCCATGAGGTTGGCCTAGGATACGACCACAACTATGCACTCGACTGCGGTGAGGAGAAAGAGGGCTTGAAACATGCTGCAAAGGTGAAGGACCCATCAAGCTCAAGGGTCCTGAACTTGTGGACAACTGCTCCAGGCATGCAGTTCTACACTGCAAACTATGTGAATGGAGTTGCTGGAAAAGATGGAGCTGTTTATGGAAAGCATTCAGGGCTCTGCTTGGAGACACAGGGATACCCAAACGCCATTAACCAGCCAAACTTCCCGTCCATCGTCGTCCAGCCAGGGGAGAAGTATCAACACACCATGTTGTTTGAGTTCTCCGTTGAGTGA 930 0.4817 MFGFWEFEGNLADVVLGCDSLEPYLKGDVPYFGCIVGRVANRIKDGKFTLNGIEYQLPINKPPNSLHGGHKGFSKKVWEVAERKEGKTPSITFKYHSHDGEEGYPGDVSVTATYTLTSSTTMRLDMEAVPENKPTPINLAQHTYWNLAGHSSGNILDHSIQIWGSHITPVDQNTVPTGEITPVKATPFDFTTEKKIGTSIHEVGLGYDHNYALDCGEEKEGLKHAAKVKDPSSSRVLNLWTTAPGMQFYTANYVNGVAGKDGAVYGKHSGLCLETQGYPNAINQPNFPSIVVQPGEKYQHTMLFEFSVE* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0199 309 SUPERFAMILY Galactose mutarotase-like 9 307 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vvi17g0199 309 CDD galactose_mutarotase_like 9 306 IPR047215 GO:0016853
Vvi17g0199 309 PANTHER ALDOSE-1-EPIMERASE 9 308 - -
Vvi17g0199 309 Pfam Aldose 1-epimerase 8 304 IPR008183 GO:0005975|GO:0016853
Vvi17g0199 309 PIRSF GALM 5 309 IPR015443 GO:0016853|GO:0019318
Vvi17g0199 309 Gene3D - 5 309 IPR014718 GO:0030246
Vvi17g0199 309 FunFam Aldose 1-epimerase 3 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0199 Vvi-Chr17 1901239 1903652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0199 9 307 Miscellaneous Gene Families AT3G47800 53.177 3.04e-105 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0199 K01785 - vvi:100250907 623.239