Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0193 ATGGCAGCAGCTTCCATTTCCAAAACCCTATCAAAGGGCGCCCGGAGTTTAAAAAACCACTGGATCCCAACTCCATTGTTTCCACATCTATATTCATCCTCTGCCCCTGTCTCAGCTTCTGCATCTGCTTCTGTTTCTTCTGCTTCGTCCGTCTCCTCTCTTACTGAACCTCAATCTTCAGGAGGGGAACAGAGACGGGGTTGGACAAAATGGTTGCTTTTCGTTCCTGGGGCTGTCACCTTTGGCCTTGGAAGTTGGCAGATCTTGAGAAGACAAGACAAGATAAATATGCTGGATTACAGACGAAAAAGATTGGATTTGGAACCCATTCCAGGAAGCAACTTATACTCTCTGAATGAAAAATTGGATTCCCTGGAGTTCAGGAGGGTTAAAGCCAAAGGATTTTTCGATGAGAAGAAATCTATTTACGTGGGTCCACGTTCCAGAAGTATATCCGGAGTGACTGAAAATGGCTACTATCTCATCACACCCCTTATGCCGATTCCTGATGACCCTGATAGTCACCAATTCTTGTCAATAGAGGATGGGTTCCGCGCAGTTGGCGAGACAAGTTTTTACAAGATCTACCAGTTGATGAACAATCTAAAAATATAG 615 0.4455 MAAASISKTLSKGARSLKNHWIPTPLFPHLYSSSAPVSASASASVSSASSVSSLTEPQSSGGEQRRGWTKWLLFVPGAVTFGLGSWQILRRQDKINMLDYRRKRLDLEPIPGSNLYSLNEKLDSLEFRRVKAKGFFDEKKSIYVGPRSRSISGVTENGYYLITPLMPIPDDPDSHQFLSIEDGFRAVGETSFYKIYQLMNNLKI* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0193 204 Pfam SURF1 family 74 184 IPR002994 GO:0016020
Vvi17g0193 204 ProSiteProfiles SURF1 family profile. 67 204 IPR002994 GO:0016020
Vvi17g0193 204 PANTHER SURFEIT LOCUS PROTEIN 43 172 IPR045214 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0193 K14998 - vvi:100256138 324.324