Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0187 ATGTTGGATCCAGCGAATGATTTGATTCCTCCTTCTTCTCCCACCATCTCCTCTGTCTCCTCCTCTGATCTCGACACCGAGTCCACAGGCTCGTTTTTCCATGACAGAAGTACGAGTTTGGGGACTCTGATGGGCGTGAGCTTCCCGGCCATTACATTTAGGGCTCAGTCGCAGCACCGGGAGGCTCAGCCGGTGCCCGCCGCGAGTGGCGTGGCCGTGGCTGGCCGCGGCGGTGGAGGGAGGAAGAGCAGGAAGGTCAAGAAAGCGCTGGGGCTAGTGGCGGAGCGCCGGCGTCGGTGGTGGAGGCTGTGCCGGGACGACGCAGCGAAGCCGGCCTCGCTGGGTGAGTTTCTGGAGGTCGAGCGGCGGTTCGGAGATGTGGCGTTTTTCGGCGCGGCGGCGGAGCTCGAAGGCGTGGTGGCTCAGCCGGAGAACGGTCGGGTGTTGTTTGCCGACGGAAGAGTACTGCCACCGCCGCAGGCGGAGGAGAGCCCGTCGACGGTAAGTTCTCTTTGTAGATTTCCGGTGTCACTCACTGGCATATTTAGTAGCAGCACAGGATAG 564 0.6206 MLDPANDLIPPSSPTISSVSSSDLDTESTGSFFHDRSTSLGTLMGVSFPAITFRAQSQHREAQPVPAASGVAVAGRGGGGRKSRKVKKALGLVAERRRRWWRLCRDDAAKPASLGEFLEVERRFGDVAFFGAAAELEGVVAQPENGRVLFADGRVLPPPQAEESPSTVSSLCRFPVSLTGIFSSSTG* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0187 187 MobiDBLite consensus disorder prediction 10 30 - -
Vvi17g0187 187 PANTHER - 7 183 IPR040344 -
Vvi17g0187 187 MobiDBLite consensus disorder prediction 61 85 - -
Vvi17g0187 187 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0187 Vvi-Chr17 1717329 1718051 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0187 - - vvi:100257806 311.612