Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0186 ATGGGGAATGCAACATCCTGTGCTCCTTCGATCTTATCCAATACTGGAGTAGTGAAAGTCTTGTCCTCTGATGGAAGACTGGAAGTATACACAAGGCCAGTCAAAGCAGCTGAGCTCATGCTGGACAAGCCAGGACACTTTGTCTGCAACTCCACCGACCTCAAAGTAGGCCAAAGGATACCGGGACTCTCAGCAGACGAAGAGCTAGAGCTGCGCCAACTCTATTTCCTTCTTCCCATGGAAATGCTCTACTCAGTGCTCACCCATGAAGAAATAAGCTCTCTCTCTTACAAGGCATCCAAAGTAGTAAAACATAGAAGCACTTCCAACAACTTTGGCAGAATTTTTCCACTGGGTCTAAGCGATTTTTGTATGTTCCCTTCAGAAACTAAGACACTGGCCTCCCCTACCACTGATCATCCTGAGCCAGTTCAGAGGTACTCAAGGCAGAGATCATGGAGCCCTGCTTTGGAGACCATCTCTGTTGTCATCTATTTATTATAA 504 0.4643 MGNATSCAPSILSNTGVVKVLSSDGRLEVYTRPVKAAELMLDKPGHFVCNSTDLKVGQRIPGLSADEELELRQLYFLLPMEMLYSVLTHEEISSLSYKASKVVKHRSTSNNFGRIFPLGLSDFCMFPSETKTLASPTTDHPEPVQRYSRQRSWSPALETISVVIYLL* 168
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0186 167 PANTHER DUF4228 DOMAIN PROTEIN-RELATED 1 161 - -
Vvi17g0186 167 Pfam PADRE domain 1 161 IPR025322 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi17g0186 Vvi-Chr17 1714388 1715151 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0186 - - vvi:100257591 322.013