Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0178 ATGGCCCTAGAATGGGTGGTGCTCGGGTACGCCGCCGGCGCCGAGGCCATAATGCTCCTCCTGCTAACCCTCCCACAACCCATAAACCCTCTGCGGAAAGGTCTGATATCAGTGACCAAAGCCCTCCTAAAACCCTTCCTCTCAGTGGTTCCATTTTGCCTGTTCCTGCTGATGGACATCTACTGGAAGTACGAGACTCGACCCACTTGCTCTTCCCACCACTGCTCTCCTTCCGACCACCTCCGCCACCAGAAATCCATGATGAAGAGCCAGCGCAACGCCACCTTGATTGCCGCTGCTTTGCTCTTCTACTGGTTGCTTTATTCTGTCACCAAGCTCGTGGACCGAATCGACGAGCTCGACCGACGGGTTCAGAAACTGAAGGATGAGGATTAA 396 0.548 MALEWVVLGYAAGAEAIMLLLLTLPQPINPLRKGLISVTKALLKPFLSVVPFCLFLLMDIYWKYETRPTCSSHHCSPSDHLRHQKSMMKSQRNATLIAAALLFYWLLYSVTKLVDRIDELDRRVQKLKDED* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0178 131 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 129 IPR008417 GO:0005783|GO:0006886|GO:0016020
Vvi17g0178 131 Coils Coil 110 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0178 Vvi-Chr17 1643348 1643743 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0178 - - vvi:100264712 266.544