Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0156 ATGTTAGGCATTGGAACATATGGTTATACTGCCCCTATGGCCAAAAAGACTGTCGTGGGCTATGAAGCTCCCGATGGGGTTGATATCAGGGGCCGATATGATGAAGAACTTGCAAAGATTTTGACTAAGGATGCCCTGCAGTTTGTGGCTGATCTGCAGAGGGAGTTTTGGAGTCAAATTAAGTATGCAATGGAGTGTAGGAGGGAGGCGAAGAGGCGGTACAATGAGGGGGCGCTGCCGAGTTTCGATCCGGCTACAAGGTATGTGAGGGAAGGTGACTGGGTGTGTGCGCCTGTGCCACCGGCTGTCGCTGATCGGAAGGTGGAGATTACCGGTCCCGTGGAAAGGAAGATGATCATCAATGCTCTCAACTCCGGTGCTAAAGTTTTCATGGCTGATTTTGAAGATGCGCTCTCACCAAGTTGGGAGAATCTGATGAGAGGGCAAGTTAACTTGAAGGATGCTGTGGACGGGACTATAAGCTTCCATGACCAGGCCAGGAACCGGGTTTACAGGCTCAATGACCAGACAGCCCAGCTTTTTGTCCGCCCGCGAGGTTGGCATCTGCCTGAGGCTCATATTCTCATTGATGGCGAGCCTGCAACAGGTTGCCTTGTGGATTTTGGCCTCTACTTCTTCCATAACTACGCAACCTTCCGCCGGAGACAGGGTGAAGGGTTTGGGCCTTTTTTCTACCTCCCTAAAATGGAGCACTCAAGGGAAGCTAAAATATGGAACTGTGTGTTTGAGAGGGCAGAGAAAATGGCTGGAATAGAAAGAGGAAGCATCAGGGCCACAGTCCTAATAGAAACACTACCAGCTGTTTTTCAAATGGATGAAATCCTCTATGAGCTCAGAGATCACTCTGTTGGTTTGAATTGTGGCAGATGGGATTACATTTTCAGCTATGTCAAAACCTTCCAGGGTCACTCTGATCGGTTGCTGCCGGACAGGGTTCAGGTTGGGATGACTCAACACTTCATGAAGAGCTACTCTGATCTTCTCATTAGGACGTGCCACAGGCGCGGAGCCCATGCAATGGGCGGCATGGCGGCTCAGATTCCAATTAGAGATGACCCGGCAGCAAATGAGGCAGCTCTTGATCTGGTGAGGAAGGACAAGCAGAGAGAAGTGAGGGCAGGGCATGATGGAACGTGGGCAGCCCACCCTGGGCTCATTCCGGCCTGCATGGAAGTCTTCAACAACAACATGGGCAATGCAGCGAATCAGATCCAAACCATGAAGCGGGAGGATGCAGCAAACATAACCGAAGAGGACCTCATACAGAGGCCTAGAGGGGTCCGAACCATGGAGGGCCTGCGCCTAAACACCCGGGTCGGGATCCAGTACTTGGCCGCATGGCTCACTGGAACTGGCTCAGTGCCTCTTTACAACCTTATGGAGGATGCCGCCACAGCTGAGATCAGCAGGGTTCAGAACTGGCAGTGGCTGAAATATGGAGTGGAATTGGATGGAGATGGGCTTGGAGTGAAGGTGAGTTTAGACCTTTTCGGGCGAGTGGTGGAAGAGGAGATGGCCAGGATTGAGAGAGAGGTTGGGCGTGAGAAGTTCAAGAAGGGAATGTACAAGGAGGCCTGCAAGATCTTCACCAGGCAATGCACAACCCCAACTCTAGATGATTTTCTGACTCTAGATGCATATAACCATATCGTCACACACCACCCTAAGCCATCATCTAGACTCTGA 1707 0.5132 MLGIGTYGYTAPMAKKTVVGYEAPDGVDIRGRYDEELAKILTKDALQFVADLQREFWSQIKYAMECRREAKRRYNEGALPSFDPATRYVREGDWVCAPVPPAVADRKVEITGPVERKMIINALNSGAKVFMADFEDALSPSWENLMRGQVNLKDAVDGTISFHDQARNRVYRLNDQTAQLFVRPRGWHLPEAHILIDGEPATGCLVDFGLYFFHNYATFRRRQGEGFGPFFYLPKMEHSREAKIWNCVFERAEKMAGIERGSIRATVLIETLPAVFQMDEILYELRDHSVGLNCGRWDYIFSYVKTFQGHSDRLLPDRVQVGMTQHFMKSYSDLLIRTCHRRGAHAMGGMAAQIPIRDDPAANEAALDLVRKDKQREVRAGHDGTWAAHPGLIPACMEVFNNNMGNAANQIQTMKREDAANITEEDLIQRPRGVRTMEGLRLNTRVGIQYLAAWLTGTGSVPLYNLMEDAATAEISRVQNWQWLKYGVELDGDGLGVKVSLDLFGRVVEEEMARIEREVGREKFKKGMYKEACKIFTRQCTTPTLDDFLTLDAYNHIVTHHPKPSSRL* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0156 568 PANTHER MALATE SYNTHASE 22 563 IPR006252 GO:0004474|GO:0006097
Vvi17g0156 568 ProSitePatterns Malate synthase signature. 286 301 IPR019830 GO:0004474|GO:0006097
Vvi17g0156 568 NCBIfam malate synthase A 40 557 IPR006252 GO:0004474|GO:0006097
Vvi17g0156 568 PIRSF Malate_synth 19 559 IPR006252 GO:0004474|GO:0006097
Vvi17g0156 568 FunFam Malate synthase 434 558 - -
Vvi17g0156 568 Gene3D Malate synthase, domain 3 23 433 IPR046363 -
Vvi17g0156 568 Pfam Malate synthase 28 558 IPR001465 GO:0004474|GO:0006097
Vvi17g0156 568 FunFam Malate synthase 23 433 - -
Vvi17g0156 568 Coils Coil 397 417 - -
Vvi17g0156 568 CDD malate_synt_A 40 558 IPR006252 GO:0004474|GO:0006097
Vvi17g0156 568 Gene3D Malate synthase, domain III 434 558 IPR044856 -
Vvi17g0156 568 SUPERFAMILY Malate synthase G 20 559 IPR011076 GO:0003824
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0156 K01638 - vvi:100261216 1157.9