Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0153 ATGGAAGTTCTTCAAACAACAACAGAGGGATCATCTTCTCGAACCTCTCTCCTTGATTCATCTCCGCAACAACCAAGGCATGACGAAGACGATGGAGACGGCGACGGAGACAGAACCATAGATGAAGCTCTTCGGCAGCTGGAGACATTCCTCAGAGTCTTCGGCTTCTGCCAGTATTCTCTGCTGAGCTTCGCCCTCTCTTCTCTCTCATTTCTCGTTTTCGGAGTCGTCACTCCGCTTCTCTGTATCGAGCTTTCCAACTGCTCCAACTGCGAGAAGTACCAGATCAAGAGGTTCGAGCTTGAGATTTTGGTTTCTGAGGTCGTCGTTGCTGCTATATCTCTTTTGTGCATTTCTCACAATCTCCGCAAGTACGGTGTGCGGAGATTTCTCTTCGTGGATCGCTACCATGGCCGTCTGATCCAGTTCCGCGAGGAGTACGTGCAGAGAGTCCGTGGGTTTTTCCGGTTGCTGGTGATCTGGATACTACCTTGCCTCCTTGTGAAGACTATCCGTGAGATCATTCGGATTATATATGCTCATCAAAATTCATGGTGGCAATCTGTTGCGATTTTGTTTGCTTTGATTGTGTCATGGTCTTATTCAACTATAATCTATTTCTCAGCTTGTGCTTTGTTCAATTTGGTTTGCAACTTACAAGTGATACACTATGAGAATTATGGGAAGCTTTTAGAAAGGGATTTAGATATTTTGGTATATATTGAGGAGCACATAGTTTTAACTCACCATTTATCGAAGATAAGTCACAGATTTCGGATATTTCTTCTTCTGGAGTTCTTGGTTGTCACAGCCAGTCAGTTTGTGGCTCTATTCCAGACAACAGGGAACCGCGGGATCATCAATTTCGTCAATGGAAGTGATTTTGTTGTCTCCTCTATTGTTCAGGTTGTTGGTATAATTCTGTGCTTGCATGGAGCTACAAAGATTTCACATAGAGCCCGAGGTATTTCATCAGTTGGCAGCAGATGGCATGCGTTAGTTACATGCAATTCTAATGAGGCTTCTCAGTCGGGAACTTTAAACAGCCGGGGAAACATGGAGGCTTCACAAGCACTGGGCTCATTACCTATAAACTACTCAGAAAGTGATTTGGAATCAATTGATGTGCCCTTGCCTGTAAACACACAATTGGTTTCTTATATGGCCACGTACCAAAAGAGACAAGCCTTCGTTTCTTATCTGCAATCGAACCCTGGGGGGTTCACTGTTTTTGGATGGATAGTTGACCGGGGACTCATCATCACAATCTTATTCGTTGAGCTCTCGCTGGTTCTCTTTGTACTCGGGAAGACCATAACTTATACTACCACTTGA 1335 0.4442 MEVLQTTTEGSSSRTSLLDSSPQQPRHDEDDGDGDGDRTIDEALRQLETFLRVFGFCQYSLLSFALSSLSFLVFGVVTPLLCIELSNCSNCEKYQIKRFELEILVSEVVVAAISLLCISHNLRKYGVRRFLFVDRYHGRLIQFREEYVQRVRGFFRLLVIWILPCLLVKTIREIIRIIYAHQNSWWQSVAILFALIVSWSYSTIIYFSACALFNLVCNLQVIHYENYGKLLERDLDILVYIEEHIVLTHHLSKISHRFRIFLLLEFLVVTASQFVALFQTTGNRGIINFVNGSDFVVSSIVQVVGIILCLHGATKISHRARGISSVGSRWHALVTCNSNEASQSGTLNSRGNMEASQALGSLPINYSESDLESIDVPLPVNTQLVSYMATYQKRQAFVSYLQSNPGGFTVFGWIVDRGLIITILFVELSLVLFVLGKTITYTTT* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0153 444 MobiDBLite consensus disorder prediction 23 38 - -
Vvi17g0153 444 Pfam Protein of unknown function (DUF3537) 43 425 IPR021924 -
Vvi17g0153 444 MobiDBLite consensus disorder prediction 1 38 - -
Vvi17g0153 444 MobiDBLite consensus disorder prediction 1 22 - -
Vvi17g0153 444 PANTHER RAS GUANINE NUCLEOTIDE EXCHANGE FACTOR K 15 440 IPR021924 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0153 Vvi-Chr17 1336751 1339594 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0153 - - vvi:104882363 837.795