Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0147 ATGAAGATTAACAGAAATGAGGCCAAGAAGCTTTTGAAGGAGTCAGGATTCGTGCAAGTTTCAGAGAGAGATAATTGGAATCTGGAGGCAGGAAAGAGATATTTCTTCACAAGGAATTACTCTACCATTGTTGCTTTTGCAATTGGAAAAAAGTATGTCCCTGGAAACGGATTCTGTATTGTTGGTGCACATACTGATAGTCCTTGTCTGAAATTAAAGCCCATTTCAAAGGTAACTAAAGGTGGGTATTTGGAGGTTGGTGTCCAAACTTATGGAGGGGGTTTATGGCATACATGGTTTGATCGTGACTTAACTGTTGCTGGACGGGTGATAATAAGAGAAGGGAAAGATGCCTTCTCTCATAAGCTTGTCAGGATTGAGGAACCCATAATGCGAATCCCTAACCTAGCAATTCACTTAGACAGGGGTGTTAATGATGGATTCAAAGTGAACGCACATAGTCATCTCGTTCCCATCTTGGCAACGGAAATCAAGGCTGAGCTCAATAAAGTGGTTTCTGAAAATGGTCCTGTTAAGAGTGGAGCTGATGAGAAAAAGTCAAATGAAAGAACAAAGACTGATAACTCAAGGCATCACTCACTTCTCCTACAGCTGCTTGCAACTCGGCTTGGCTGTGAACCAGATGACATATGTGATTTTGAGTTACAAGCATGTGACACTCAACCAAGTACAGTTGCTGGTGCCATGAAAGAATTCATTTTCTCGGGAAGGCTTGATAACCTCTGCATGTCATTTTGCTCTCTAAAGGCAATGATAGATGCAACAGCTTCTGAAAGTACTCTTGAGGAGGAAACTGGTGTTAGAATGGTGGCATTGTTTGATCATGAGGAGATTGGATCTAATTCAGCACAAGGAGCTGGCTCTCCTGTCATGTTTGATGCATTATCACAAATAACTAACTCCTTCACCTCTGATTCTAAGCTGCTTCAGATAGCAATTCAGAGGAGTTTCCTTGTATCTGCTGACATGGCACATGCCCTCCACCCTAATTACATGGACAAACATGATGAAAATCATCAACCCAAGTTGCATGGAGGACTTGTCATCAAGCACAATGCAAATCAACGCTATGCAACCAATGCAGTCACTTCTTTCATATTCAAGGAAATAGCTGCAAAGCACAACCTTCCAGTCCAGGATTTTGTGGTCCGCAATGACATGCCTTGTGGTTCAACCATTGGTCCCATCCTTGCAAGCGGTGTGGGGATTCGCACTGTTGATGTTGGTGCCCCACAGTTATCAATGCACAGCATAAGAGAAATGAGCGCAGTTGATGATGTGAAGCATTCGTACGAGCATTTCAGGGCCTATTTCCAAGAGTTCTCTTGCCTTGATGCTAAGATTACCGTGGACATCTAG 1380 0.429 MKINRNEAKKLLKESGFVQVSERDNWNLEAGKRYFFTRNYSTIVAFAIGKKYVPGNGFCIVGAHTDSPCLKLKPISKVTKGGYLEVGVQTYGGGLWHTWFDRDLTVAGRVIIREGKDAFSHKLVRIEEPIMRIPNLAIHLDRGVNDGFKVNAHSHLVPILATEIKAELNKVVSENGPVKSGADEKKSNERTKTDNSRHHSLLLQLLATRLGCEPDDICDFELQACDTQPSTVAGAMKEFIFSGRLDNLCMSFCSLKAMIDATASESTLEEETGVRMVALFDHEEIGSNSAQGAGSPVMFDALSQITNSFTSDSKLLQIAIQRSFLVSADMAHALHPNYMDKHDENHQPKLHGGLVIKHNANQRYATNAVTSFIFKEIAAKHNLPVQDFVVRNDMPCGSTIGPILASGVGIRTVDVGAPQLSMHSIREMSAVDDVKHSYEHFRAYFQEFSCLDAKITVDI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0147 459 CDD M18_DAP 6 446 - -
Vvi17g0147 459 MobiDBLite consensus disorder prediction 179 196 - -
Vvi17g0147 459 Gene3D Zn peptidases 6 444 - -
Vvi17g0147 459 Gene3D Aminopeptidase i, Domain 2 68 228 IPR023358 GO:0004177
Vvi17g0147 459 Pfam Aminopeptidase I zinc metalloprotease (M18) 7 445 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vvi17g0147 459 SUPERFAMILY Aminopeptidase/glucanase lid domain 70 223 - -
Vvi17g0147 459 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 280 298 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vvi17g0147 459 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 58 74 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vvi17g0147 459 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 323 339 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vvi17g0147 459 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 412 427 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vvi17g0147 459 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 91 111 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vvi17g0147 459 PRINTS Aminopeptidase I zinc metalloprotease (M18) signature 127 144 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vvi17g0147 459 MobiDBLite consensus disorder prediction 175 196 - -
Vvi17g0147 459 FunFam Aspartyl aminopeptidase 1 69 229 - -
Vvi17g0147 459 PANTHER ASPARTYL AMINOPEPTIDASE 6 458 IPR001948 GO:0004177|GO:0006508|GO:0008270
Vvi17g0147 459 SUPERFAMILY Zn-dependent exopeptidases 6 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0147 Vvi-Chr17 1287518 1304037 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0147 K01267 - vvi:100249091 907.516