Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0146 ATGGCGACCCTTTCGGCGAATTTGGAGGATATTCCTTCTGTGGATCTCATGACGGAGCTTCTTCGTCGCATGAAGTGCTCTACCAAGCCTGACAAACGCCTCATTCTAATCGGTCCACCTGGATCAGGAAAAGGTACCCAATCTCCAATTATAAAGGATGAATACTGCTTGTGCCACTTGGCTACTGGTGATATGTTAAGAGCAGCTGTTGCTGCTAAAACCCCTCTTGGTATTAAGGCTAAAGAGGCTATGGAGAAGGGTGAACTTGTTTCTGATGATCTGGTTGTTGGCATTATAGATGAAGCAATTAAGAAGCCTTCATGTCAGAAAGGCTTCATTCTTGATGGATTTCCGAGGACTGAGGTCCAAGCACAAAAGCTTGATGAGATGCTTGAAAAGCAGGGTGTTAAAGTTGATAAGGTGCTGAACTTTGCAATTGATGATGGGATCTTGGAAGAGAGAATTACGGGTCGTTGGATGCACCCATCTAGTGGTAGGACTTACCACACAAAATTTGCACCTCCGAAGGTTCATGGCATTGATGATGTCACTGGTGAACCTTTGATTCAGCGTAAAGATGATACTGCTGCTGTTCTCAAGTCAAGGCTGGAGGCATTTCACAGGCAAACAGAACCAGTAATTGACTATTACACCAAGAAGGGCATCGTCGCTAACCTTCATGCAGAGAAATCCCCGAAGGAGGTCACGACTGAGGTTCAGAAGGCCCTTTCTTCGTGA 738 0.4553 MATLSANLEDIPSVDLMTELLRRMKCSTKPDKRLILIGPPGSGKGTQSPIIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMEKGELVSDDLVVGIIDEAIKKPSCQKGFILDGFPRTEVQAQKLDEMLEKQGVKVDKVLNFAIDDGILEERITGRWMHPSSGRTYHTKFAPPKVHGIDDVTGEPLIQRKDDTAAVLKSRLEAFHRQTEPVIDYYTKKGIVANLHAEKSPKEVTTEVQKALSS* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0146 245 FunFam Adenylate kinase mitochondrial 32 245 - -
Vvi17g0146 245 CDD ADK 33 235 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0146 245 Coils Coil 240 245 - -
Vvi17g0146 245 Gene3D - 4 244 IPR027417 -
Vvi17g0146 245 Pfam Adenylate kinase 36 221 - -
Vvi17g0146 245 PRINTS Adenylate kinase signature 63 77 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0146 245 PRINTS Adenylate kinase signature 208 222 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0146 245 PRINTS Adenylate kinase signature 35 48 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0146 245 PRINTS Adenylate kinase signature 112 128 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0146 245 PRINTS Adenylate kinase signature 191 206 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0146 245 ProSitePatterns Adenylate kinase signature. 112 123 IPR033690 -
Vvi17g0146 245 PANTHER NUCLEOTIDE KINASE 7 240 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0146 245 NCBIfam adenylate kinase 33 243 IPR006259 GO:0004017|GO:0005524|GO:0016776
Vvi17g0146 245 Pfam Adenylate kinase, active site lid 158 193 IPR007862 GO:0004017
Vvi17g0146 245 Hamap Adenylate kinase [adk]. 32 244 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0146 245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 32 243 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0146 Vvi-Chr17 1281027 1285167 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0146 K00939 - vvi:100245612 488.419