Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0142 ATGGCGGGACTCTGCCGCCTGAAATTGGCGGCGCCACTGCTGCTCCACCTTCGGAGACTCACTCTCAGCCGATCTTTCGGTGCAGCCGCAGCAGCTCAACCACAATTCAACGTCGATTACCATCCCGAGAGCGAGTACGAGCCCCTCCGTGGATCGGCTGCGGCGCCGATGGTAGATTCTGAAGGTTCGGCGCCGAGCAGAGGAGTGCAGTGGGTGTTCATAGGAAACCCCGGCGCAAAGAAGCACGTGTACGCAGGGAAACTCTCAAAGCTTCTACAGGTTCCTCACATTTCAATCGCGAGCCTCGTTCGGCAAGATCTTCATCCTCGTTCTTCACTTTACGAACAGATTGCAAATGCAGTGAACAATGGTAAACTTGTTCCGGAGAATGTCATATTTGGATTGTTGTCGGAGAGGCTGGAAGCTGGATATTACAGAGGTGAGTGCGGGTTCATTCTTGATGGAATTCCTCGATCTGTGAGCCAAGCGGAGATCCTCGACCAACTTGCTGTCATTGATCTGGTTGTGAATTTTAAATGCGCTGATGATTTCTTTGTTGAAGACCGAGAAAGTGGCATTTCTTCCCATTGTAATGAATGTTGTAGCACAAACAACTCTGATTCTGTAACTCTGGACATTCCCACAAGGCCTGTTCAAGCAAAAATTGCAAAATCAGTCACTACTAGCAAGGAAGGTGCTTGGAAGGGAACAGTTCGGGTCTATTTGGAGCAGCATTTGAGAGGTGAAAATGGAAGAGTGGTAATGGCCCTTTATGAAGGCAATTGTTTTCAGATAAGCCCCATTTGA 807 0.4907 MAGLCRLKLAAPLLLHLRRLTLSRSFGAAAAAQPQFNVDYHPESEYEPLRGSAAAPMVDSEGSAPSRGVQWVFIGNPGAKKHVYAGKLSKLLQVPHISIASLVRQDLHPRSSLYEQIANAVNNGKLVPENVIFGLLSERLEAGYYRGECGFILDGIPRSVSQAEILDQLAVIDLVVNFKCADDFFVEDRESGISSHCNECCSTNNSDSVTLDIPTRPVQAKIAKSVTTSKEGAWKGTVRVYLEQHLRGENGRVVMALYEGNCFQISPI* 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0142 268 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 187 IPR027417 -
Vvi17g0142 268 PANTHER NUCLEOTIDE KINASE 61 188 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0142 268 Gene3D - 64 242 IPR027417 -
Vvi17g0142 268 CDD ADK 70 203 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0142 268 Pfam Adenylate kinase 74 187 - -
Vvi17g0142 268 ProSitePatterns Adenylate kinase signature. 151 162 IPR033690 -
Vvi17g0142 268 PRINTS Adenylate kinase signature 72 85 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vvi17g0142 268 PRINTS Adenylate kinase signature 151 167 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0142 Vvi-Chr17 1242984 1245678 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0142 K00939 - vvi:100261051 461.07