Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0129 ATGCCAAAGAGAACTACGCACACCTACTCGAGCGAAGACGCCGCCCCAGATGGCCCTGAGTCCGATCTCTTCGTCTACTATTGCAAGCACTGTGGATCTCATGTCCTCATCACTGATACCCAATTGCAGAAAGTGCCTAAGAGGAAAACTGACAGATCTTATGTGTTGGACAAAACGAAGCATCTTGCAAGGCTAAATATCAATGAAGCAGGAAAAGTTCTTTTAAAACGTGGTGAAGGGAAGTTGGAAAAGCAATTCCGTATGAACTGCATGGGTTGTGGACTGTTTGTTTGCTACCGCTCTGAGGAAGATTTGGAAAGTGCTACTTTCATTTATGTTGTTGATGGTGCGCTTAGTACAGTTGCTGCTGAAACCAACCCACAGGATGCTCCTGTGCCTCCTTGCATATCACAGTTAGAAGGGGGGCTTGTCCAAGTGGCAATAGAGGTGGAAGACCGTGCACAACGCTCTGCAATTACAAGGGTGAATGCAGATGATGTTCGAGTGACTGTAGCTGCGCCTGCAGCCCGTGGGGAAGCTAACAATGAACTTTTGGAATTCATGGGCAAAGTACTGGGTCTAAGACTGAGCCAGATGACTCTTCAGAGGGGGTGGAATAACAAGTCGAAGCTCCTAGTGGTGGAGGACTTATCTGCAAGGCAGGTGTATGAGAAACTTTTGGAGGCTGTACAACCTTGA 699 0.475 MPKRTTHTYSSEDAAPDGPESDLFVYYCKHCGSHVLITDTQLQKVPKRKTDRSYVLDKTKHLARLNINEAGKVLLKRGEGKLEKQFRMNCMGCGLFVCYRSEEDLESATFIYVVDGALSTVAAETNPQDAPVPPCISQLEGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGKVLGLRLSQMTLQRGWNNKSKLLVVEDLSARQVYEKLLEAVQP* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0129 232 Hamap UPF0235 protein YggU [yggU]. 140 228 IPR003746 -
Vvi17g0129 232 NCBIfam DUF167 family protein 144 213 IPR003746 -
Vvi17g0129 232 SUPERFAMILY YggU-like 133 220 IPR036591 -
Vvi17g0129 232 FunFam UPF0235 protein isoform X1 132 231 - -
Vvi17g0129 232 SMART DUF167_2 140 216 IPR003746 -
Vvi17g0129 232 Pfam Uncharacterised ACR, YggU family COG1872 144 215 IPR003746 -
Vvi17g0129 232 Gene3D - 133 231 IPR036591 -
Vvi17g0129 232 PANTHER OS07G0295200 PROTEIN 1 232 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0129 - - vvi:100247416 463.381