Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0120 ATGGTGGGTGTGCAGAGAATGTGGGTTGTGTTGTTTTGGACTGTGTTAAACTTCTTCTTCTCTGGTTTGGTTGATGGGTTTGTTTTAGGGGAGCAGCCACTATCGAAAATTGCCATCCACAGGATCACTCTTGGCCTTAGTAATTCGACTTCCATTAGAGCTTCTCCGATCCTCCTCGGCTCCAATGGTGAGGATACTGAATGGGTGAGTGTTGATCTTGAGCATGATAATCCATCCGTTGGTGACTGGATTGGGGTTTTTTCTCCTGCAAACTTCAACTCATCCACCTGTTTGCCGGAAAGCTCAGAATCAGAAGACCAGGCTCCATATATATGCTCAGCCCCAATTAAGTATAAGTTTGTGAAAGACACCAACTCAGGTTATACAAAGACAGGGAAAGCTTCTTTGAAGTTCCAAATAATCAATCAGCGGGCAGATTTCTCCTTTGTGTTATTTTCAGGCGGGTTGTCAAAACCAAAACTGGTGGCAGTTTCGAACTCTGTATCATTTGCAAATCCTAAAGCCCCCCTTTATCCACGCCTTGCTCTGGGAAAGGCTTGGAATGAAATGGCAGTGACATGGACAAGTGGCTATAACATAGATGAAGCCGTTCCATTTGTTGAATGGGGTCTAAAGGGAGGACATCAAAAGCGTTCACCGGCACGTACGGTTGGATGGCGTGATCCAGGTTTCATACACACAAGTTTCTTAAAGGATTTATGGCCAAATGCAAGGTACAATTACAGGATGGGTCATCTCTTGTCCAATGGTTCTTATGTCTGGAGCAGGTCTTATTCATTCAGATCATCCCCATTTCCTGGACAGGACTCTTTACAGCGAGTTATAATATTTGGCGACTTGGGAAAGGCAGAGCGTGATGGTTCAAATGAATATAGTAACTATCAGCCGGGTTCACTCAACACGACAGACCAACTCATAAAGGACTTGCCCAACTTTGACATAGTTTTCCATATAGGAGACTTACCATATTCAAATGGGTACCTCTCGCAATGGGACCAGTTCACTTCACAGGTGGAGCCGATGGCGTCAACTGTGCCATATATGGTTGCTAGTGGTAATCATGAACGTGATTGGCCAAATTCGGGATCCTATTATGATGGGACGGACTCTGGTGGGGAATGTGGTGTGCCAGCTGAGACTACGTTCTATTTTCCTGCGAAGAACAGATCTAAGTTTTGGTACTCGGCAGACTATGGCATGTTTCATTTTTGTGTAGCGGACACCGAAAATGATTGGCGGAAGGGAACCGAACAGTACAGGTTCCTTGAGCATTGTCTTGCATCAGTGGACAGGAGGAAACAGCCTTGGTTGATCTTTACTGGTCATCGGGTCCTTGGGTACTCCTCTGACTTTTGGTATGCCTTGGAGGGATCATATGCAGAGCCCGGGGGAAGGGAGAGCTTGCAGAAGCTTTGGCAGAAGTACAAGGTGGATATTGCATTATTTGGCCATGTCCACAACTATGAAAGAACATGCCCTATTTACCAGAATCGGTGTGTGAACCCTGAAAAATCTCACTACTCTGGCACAGTGAATGGGACTATCCATATCGTGGTTGGAGGGGGAGGGAGCCACTTATCCAATTTCACCGATGAGGTACCCAGTTGGAGTATTTACAGAGATTACGACTATGGATTTGTCAAAATGACAGCGTTCAACCACTCATCTCTTCTATTTGAGTACAAGAAGAGCCGTGATGGGAAGGTATATGATTCTTTCACAATCTCAAGGGACCACAGAGATGTCAAGGGCTGTGCGCATGATGGCTGTGAGCCAACTACTTTGGCAAATTGA 1815 0.4556 MVGVQRMWVVLFWTVLNFFFSGLVDGFVLGEQPLSKIAIHRITLGLSNSTSIRASPILLGSNGEDTEWVSVDLEHDNPSVGDWIGVFSPANFNSSTCLPESSESEDQAPYICSAPIKYKFVKDTNSGYTKTGKASLKFQIINQRADFSFVLFSGGLSKPKLVAVSNSVSFANPKAPLYPRLALGKAWNEMAVTWTSGYNIDEAVPFVEWGLKGGHQKRSPARTVGWRDPGFIHTSFLKDLWPNARYNYRMGHLLSNGSYVWSRSYSFRSSPFPGQDSLQRVIIFGDLGKAERDGSNEYSNYQPGSLNTTDQLIKDLPNFDIVFHIGDLPYSNGYLSQWDQFTSQVEPMASTVPYMVASGNHERDWPNSGSYYDGTDSGGECGVPAETTFYFPAKNRSKFWYSADYGMFHFCVADTENDWRKGTEQYRFLEHCLASVDRRKQPWLIFTGHRVLGYSSDFWYALEGSYAEPGGRESLQKLWQKYKVDIALFGHVHNYERTCPIYQNRCVNPEKSHYSGTVNGTIHIVVGGGGSHLSNFTDEVPSWSIYRDYDYGFVKMTAFNHSSLLFEYKKSRDGKVYDSFTISRDHRDVKGCAHDGCEPTTLAN* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0120 604 Coils Coil 603 604 - -
Vvi17g0120 604 Gene3D - 175 273 - -
Vvi17g0120 604 Pfam Iron/zinc purple acid phosphatase-like protein C 520 579 IPR025733 -
Vvi17g0120 604 Pfam Fn3-like domain from Purple Acid Phosphatase 52 172 IPR040974 -
Vvi17g0120 604 Pfam Purple acid Phosphatase, N-terminal domain 180 268 IPR015914 GO:0003993|GO:0046872
Vvi17g0120 604 CDD MPP_PAPs 279 584 IPR041792 -
Vvi17g0120 604 PANTHER PURPLE ACID PHOSPHATASE-RELATED 26 587 - -
Vvi17g0120 604 Pfam Calcineurin-like phosphoesterase 280 495 IPR004843 GO:0016787
Vvi17g0120 604 SUPERFAMILY Purple acid phosphatase, N-terminal domain 154 271 IPR008963 GO:0003993|GO:0046872
Vvi17g0120 604 Gene3D - 274 588 IPR029052 -
Vvi17g0120 604 SUPERFAMILY Metallo-dependent phosphatases 275 586 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0120 Vvi-Chr17 1004118 1009753 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0120 48 582 Miscellaneous Gene Families AT2G03450 30.298 1.99e-61 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0120 K22390 - vvi:100252448 1245.72