Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0119 ATGGTGGGTGTGCAGAGAATGTGGGGTGTGGTGTTTTGGACTGTGTTAAACTTCTTCTTCTCTGGTTTGGTTGATGGGTTTGTTTTAGGGGAGCAGCCACTATCGAAAATTGCTATCCACAGGATCACTCTTGGCCTTAGTAATTCGACTTCCATTAGAGCTTCTCCGATCCTCCTCGGCTCCAATGGTGAGGATACTGAATGGGTGAGTGTTGATCTTGAGCATGATAATCCATCCGTTGGTGACTGGATTGGGGTTTTTTCTCCTGCAAACTTCAACTCATCCACCTGTTCGCCGGAAAGCTCAGAATCAAAAGACCAGGCTCCATATATATGCTCAGCCCCAATTAAGTATAAGTTTGTGAAAGACACCGACTCAGGTTATACAAAGACAGGGAAAGCTTCTTTGAAGTTCCAAATAATCAATCAGCGGGCAGATTTCTCCTTTGTGTTATTTTCAGGCGGGTTGTCAAAACCAAAACTGGTGGCAGTTTCGAACTCTGTATCATTTGCAAATCCTAAAGCCCCCCTTTATCCACGCCTTGCTCTGGGAAAGGCTTGGAATGAAATGGCAGTGACATGGACAAGTGGCTATAACATAGATGAAGCCGTTCCATTTGTTGAATGGGGTCTAAAGGGAGGACATCATAAGCGCTCGCCAGCTGGAACATTGACATTTCACCAGAACAGCATGTGTGGTTCACCGGCACATACGGTTGGATGGCGTGATCCAGGTTTCATACACACAAGTTTCTTAAAGGATTTATGGCCAAATGCAAGGTACAATTACAGGATGGGTCATCTCTTGTCCAATGGCTCTTATGTCTGGAGCAGGTCTTATTCATTCAGATCATCCCCATTTCCTGGACAGGACTCTTTACAGCGAGTTATAATATTTGGCGACTTGGGAAAGGCAGAGCGTGATGGTTCAAATGAATATAGTAACTATCAGCCGGGTTCACTCAACACGACAGATCAACTCATAAAGGACTTGCCCAACTTTGACATAGTTTTCCATATAGGAGACTTAACATATTCAAATGGGTACCTCTCGCAATGGGATCAGTTCACTTCACAGGTGGAGCCAATGGCGTCAACTGTACCATATATGGTTGCTAGTGGTAATCATGAACGTGATTGGCCAAATTCGGGATCCTATTATGATGGGACGGACTCTGGTGGGGAATGTGGTGTGCCAGCTGAGACTACATTCTATTTTCCTGCGAAGAACAGATCTAAGTTTTGGTACTCGGCAGACTATGGCATGTTTCATTTTTGTGTAGCGGACACCGAAAATGACTGGCGGAAGGGAACCGAACAGTACAGGTTCCTTGAGCATTGTCTTGCATCAGTGGACAGGAGGAAACAGCCTTGGTTGATCTTTACTGGTCATCGGGTCCTTGGGTACTCCTCTGAATTTTGGTATGCCTTGGAGGGATCATATGCAGAGCCCGGGGGAAGGAAGAGCTTGCAGAAGCTTTGGCAGAAGTACAAGGTGGATATTGCATTATTTGGCCATGTCCACAACTATGAAAGAATATGCCCTATTTACCAGAATCGGTGTGTGAACCCTGAAAAATCTCACTACTCTGGCACAGTGAATGGGACTATCCATATCGTGGTTGGAGGGGGAGGGAGCCACTTATCCGAGTTCGCTGATGAGGTACCCAGTTGGAGTATTTACAGAGATTACGACTATGGATTTGTCAAAATGACAGCGTTCAACCACTCATCTCTTCTATTTGAGTACAAGAAGAGCAGTGATGGGAAGGTATATGATTCTTTCACAATCTCAAGGGACTAG 1803 0.4526 MVGVQRMWGVVFWTVLNFFFSGLVDGFVLGEQPLSKIAIHRITLGLSNSTSIRASPILLGSNGEDTEWVSVDLEHDNPSVGDWIGVFSPANFNSSTCSPESSESKDQAPYICSAPIKYKFVKDTDSGYTKTGKASLKFQIINQRADFSFVLFSGGLSKPKLVAVSNSVSFANPKAPLYPRLALGKAWNEMAVTWTSGYNIDEAVPFVEWGLKGGHHKRSPAGTLTFHQNSMCGSPAHTVGWRDPGFIHTSFLKDLWPNARYNYRMGHLLSNGSYVWSRSYSFRSSPFPGQDSLQRVIIFGDLGKAERDGSNEYSNYQPGSLNTTDQLIKDLPNFDIVFHIGDLTYSNGYLSQWDQFTSQVEPMASTVPYMVASGNHERDWPNSGSYYDGTDSGGECGVPAETTFYFPAKNRSKFWYSADYGMFHFCVADTENDWRKGTEQYRFLEHCLASVDRRKQPWLIFTGHRVLGYSSEFWYALEGSYAEPGGRKSLQKLWQKYKVDIALFGHVHNYERICPIYQNRCVNPEKSHYSGTVNGTIHIVVGGGGSHLSEFADEVPSWSIYRDYDYGFVKMTAFNHSSLLFEYKKSSDGKVYDSFTISRD* 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0119 600 Pfam Purple acid Phosphatase, N-terminal domain 180 283 IPR015914 GO:0003993|GO:0046872
Vvi17g0119 600 Pfam Fn3-like domain from Purple Acid Phosphatase 52 172 IPR040974 -
Vvi17g0119 600 CDD MPP_PAPs 294 599 IPR041792 -
Vvi17g0119 600 Gene3D - 289 600 IPR029052 -
Vvi17g0119 600 SUPERFAMILY Purple acid phosphatase, N-terminal domain 154 286 IPR008963 GO:0003993|GO:0046872
Vvi17g0119 600 SUPERFAMILY Metallo-dependent phosphatases 290 599 IPR029052 -
Vvi17g0119 600 Gene3D - 175 288 - -
Vvi17g0119 600 Pfam Iron/zinc purple acid phosphatase-like protein C 535 594 IPR025733 -
Vvi17g0119 600 PANTHER PURPLE ACID PHOSPHATASE-RELATED 30 600 - -
Vvi17g0119 600 Pfam Calcineurin-like phosphoesterase 295 510 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0119 Vvi-Chr17 992567 998225 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0119 50 597 Miscellaneous Gene Families AT2G03450 30.328 5.69e-65 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0119 K22390 - vvi:100252448 1202.96