Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0118 ATGCCTATGACTGGAGAAAAACCAGAGGAAGTAAAACCACTAGTGGTGGAAGGTGATGATGACGGAGAAGAAGAAGAGGAAGAGGATTCGTGGTCATCGGATTCCGAAATCGGAGAAGCCCTAGACTGGTTGGACACGAAAGATGGCAGTGAAGTTGGCGTGGATGGACCGATTAGTCTAAATTCGAGGCGTCCAAATGCTCATGGAGGGCTTCACTCTCGCATTAATGCATCGACGCTACAACCTCTCTCGAACCGGAACCAGAAGTTCTCCAATCACATCCATGCTTCACCATTGGAGGAGTGGGAGGGGAGGTTGAATGTTGGCATGTCAAACTCTGTGACAACTGCCATTCGTGAAAGTGTTCGAGGGATGGCCATTGGTAAAACTAAAACCACCGAGAAAGCAGACCGTGCAACTGTTGAACAGGCTATTGATCCTAGAACTCGCATGGTTTTATTCAAAATGCTGAATCGAGGTGTGTTCCATGATATTAACGGCTGCATTTCAACTGGAAAAGAAGCAAATGTTTATCATGCCACAAAATCCGATGGTCACGAACTTGCAATTAAAGTGTACAAAACTTCTGTTCTAGTATTTAAGGATAGAGATCGGTATGTACAAGGAGACTACCGTTTCAGACATGGATACTGCAAGCACAATCCTAGGAAAATGGTAAAGACATGGGCTGAGAAAGAAATGAGAAATCTTTTGAGGCTAAAGGCAGCAGGAATCAGGTGCCCAACTCCGTACCTATTGAGGCTTCATGTTTTAGTCATGGAATTCATAGGAAAGGCAGGTTGGGCTGCACCTCGTCTTAAGGATGCTGCTTTATCTCTTGACAAATTGCGTGAAGGTTATGTGGAGATGATTATGGCAATGCGGACGTTATATCAGAAGTGCAAACTGGTACATGGAGACCTCAGTGAATATAACATACTTTATTTTGAGGGCCACTTACATGTTATTGATGTTTCTCAAGCAGTTGATCTTGACCATCCTCATGCCCTTGACTTTCTACGTGAAGATTGTGTCCATGTTTCTGATTTTTTTAAAAAACATGGTGTAGCTGTTATGACAATTCGAGAACTGTTTGATTTCATAGTTGATCCAACCATTACTGATGAGTCAGTGGATGATTATCTGGAACAGGTTCAACAAAAGATTTTGGCAAGAGAGATATCTCCAGAGGATGAGATTGCAGATTCTGTATTTGTACAGTCTTTTATTCCCAAGGCACTAGAAGATGTGAAGAATGCCGAGCAGGATGTAATCCGGCTAACAAGTGGCAAGGACACTACAGACATGTACTATAAAACTATTACAGGACTCAAACAAGCTCTTTCTCTATCTCAACCTTCTCCTCCACAAACCGAGCCGCCCCTTAAAGAAAACTCCTCTCTGGATCCAACTGCTCATTCTAACTCAGGCGAAGACATAATAGAATCTGGGACAGATGGGGATGAAGAGAACTCAAGTGACACAGACAGTGGTTCCTCGTCTGAAATCGAGACACAGACCCCCACCGATAAGAAAGCTGCCCGAAAAGAGAACAAGAAGAAGGTGAAAGAAGAGAAGAGGGAAGCCCGGAAGACCAAGGTGCCAAAGGCAGTGAAGAAACGAAAGAAGAAACTGGCCAAAGCTCACAAGACCAGGTAG 1659 0.4388 MPMTGEKPEEVKPLVVEGDDDGEEEEEEDSWSSDSEIGEALDWLDTKDGSEVGVDGPISLNSRRPNAHGGLHSRINASTLQPLSNRNQKFSNHIHASPLEEWEGRLNVGMSNSVTTAIRESVRGMAIGKTKTTEKADRATVEQAIDPRTRMVLFKMLNRGVFHDINGCISTGKEANVYHATKSDGHELAIKVYKTSVLVFKDRDRYVQGDYRFRHGYCKHNPRKMVKTWAEKEMRNLLRLKAAGIRCPTPYLLRLHVLVMEFIGKAGWAAPRLKDAALSLDKLREGYVEMIMAMRTLYQKCKLVHGDLSEYNILYFEGHLHVIDVSQAVDLDHPHALDFLREDCVHVSDFFKKHGVAVMTIRELFDFIVDPTITDESVDDYLEQVQQKILAREISPEDEIADSVFVQSFIPKALEDVKNAEQDVIRLTSGKDTTDMYYKTITGLKQALSLSQPSPPQTEPPLKENSSLDPTAHSNSGEDIIESGTDGDEENSSDTDSGSSSEIETQTPTDKKAARKENKKKVKEEKREARKTKVPKAVKKRKKKLAKAHKTR* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0118 552 MobiDBLite consensus disorder prediction 1 69 - -
Vvi17g0118 552 MobiDBLite consensus disorder prediction 461 481 - -
Vvi17g0118 552 CDD RIO1_euk 165 354 - -
Vvi17g0118 552 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO1 21 552 - -
Vvi17g0118 552 Pfam RIO1 family 176 363 - -
Vvi17g0118 552 MobiDBLite consensus disorder prediction 508 532 - -
Vvi17g0118 552 MobiDBLite consensus disorder prediction 448 552 - -
Vvi17g0118 552 Gene3D Phosphorylase Kinase; domain 1 162 264 - -
Vvi17g0118 552 ProSitePatterns RIO1/ZK632.3/MJ0444 family signature. 303 314 IPR018935 GO:0004674|GO:0005524
Vvi17g0118 552 FunFam Serine/threonine-protein kinase RIO1 162 264 - -
Vvi17g0118 552 SUPERFAMILY Protein kinase-like (PK-like) 165 351 IPR011009 -
Vvi17g0118 552 PIRSF STPK_RIO1 6 551 IPR017407 GO:0004674
Vvi17g0118 552 MobiDBLite consensus disorder prediction 533 552 - -
Vvi17g0118 552 Coils Coil 512 532 - -
Vvi17g0118 552 MobiDBLite consensus disorder prediction 16 35 - -
Vvi17g0118 552 SMART rio_2 134 370 IPR000687 GO:0004674|GO:0005524
Vvi17g0118 552 Gene3D Transferase(Phosphotransferase) domain 1 270 410 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0118 K07178 - vvi:100244003 981.089