Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0117 ATGGATGTTGAACTCAAAGAGATGCTCGATGATCTCCAAGCTCTCAAACGATCGTTGCCTGATCCTTCTCATCAAGCTTCCATCGACAAGTTGCAAGTGCATGTTGAACATCTTACGAATCTTGCACAGTATGCTCCTGCTCGGCGTTCAAAAGTCAAGGATATGAGTGCTGAGGTGGTAGATAGCAATCCTTACAGTAGGCTTATGGCACTTCAGAGGATGGGCATTGTGGAAAACTATGAAAGAATACGAGAATTCTCGGTTGCCATAGTTGGAATAGGTGGTGTAGGCAGTGTTGCAGCTGAGATGCTAACAAGGTGTGGCATAGGTCGCCTTCTGTTGTATGATTATGATAAAGTGGAGTTAGCTAACATGAATAGGCTATTTTTTCGTCCAGAGCAGGTTGGTATGACGAAAACTGATGCTGCTGTTCAGACTCTTTCGGATATAAATCCTGATGTTGTGCTTGAGAGCTACACACTGAACATCACAACAGTGCAAGGTTTTGAAACTTTTATGTCAAGCCTGAGAAAAAAAACATTTCGTCCAAAGAAAGAAGGTAGCGGAGTCGATCTTGTTTTAAGTTGTGTAGATAACTATGAAGCAAGGATGGTTGTAAACCAGGCTTGCAATGAGCTGAATCAGACATGGATGGAGTCCGGTGTATCTGAGGATGCTGTTTCAGGTCATATACAATTGTTGATTCCTGGAGAAACTGCTTGTTTTGCATGTGCGCCTCCTTTGGTTGTAGCATCTGGAGTTGATGAACGCACGCTCAAGCGTGAAGGGGTCTGTGCTGCATCTTTACCTACCACCATGGGAGTTGTTGCTGGGCTTCTAGTTCAAAACACACTTAAATTCTTGCTAAAGTTTGGACATGTCTCCCCATACTTGGGATATAATGCTCTTAAAGACTACTTTCCAACCATGGAAATGAGGCCAAACCCTCAATGTTCAAATGCTTCCTGTCTGGAACGACAGAAAGAATACCTTCTAGCAAAGCCGGCTAGGGATGCTGCAGCTAAAGCAAAGATGGAGGCTGAAGCATTAGTAGTAGCAGAATGCCCAATTCATGTTGATAATGAATGGAATATAAGTGTTGTTGATGACAGTGAACTGGATAGGACAGATGGCAGGAGCTCAGATGCCCTTCCAGAAGGTCTTACTCACGAGCTCCCAACTGCAGACGAGTTTGAAAAACAACCCACTCCTGAAACGACCTTTAACTCTGTAGATGACCTTGATGATCTCCGGAGGCAACTTGATGCTCTAAATGCTGATTAA 1284 0.4377 MDVELKEMLDDLQALKRSLPDPSHQASIDKLQVHVEHLTNLAQYAPARRSKVKDMSAEVVDSNPYSRLMALQRMGIVENYERIREFSVAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDKVELANMNRLFFRPEQVGMTKTDAAVQTLSDINPDVVLESYTLNITTVQGFETFMSSLRKKTFRPKKEGSGVDLVLSCVDNYEARMVVNQACNELNQTWMESGVSEDAVSGHIQLLIPGETACFACAPPLVVASGVDERTLKREGVCAASLPTTMGVVAGLLVQNTLKFLLKFGHVSPYLGYNALKDYFPTMEMRPNPQCSNASCLERQKEYLLAKPARDAAAKAKMEAEALVVAECPIHVDNEWNISVVDDSELDRTDGRSSDALPEGLTHELPTADEFEKQPTPETTFNSVDDLDDLRRQLDALNAD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0117 427 FunFam Putative ubiquitin-like modifier-activating enzyme 5 82 344 - -
Vvi17g0117 427 MobiDBLite consensus disorder prediction 373 414 - -
Vvi17g0117 427 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 60 324 IPR035985 GO:0008641
Vvi17g0117 427 Coils Coil 414 427 - -
Vvi17g0117 427 ProSitePatterns D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 88 116 IPR029752 -
Vvi17g0117 427 CDD ThiF_MoeB_HesA_family 64 312 - -
Vvi17g0117 427 Gene3D - 82 344 - -
Vvi17g0117 427 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 47 416 IPR045886 -
Vvi17g0117 427 Pfam ThiF family 65 319 IPR000594 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0117 60 175 EF-hand Containing Proteins AT2G30110 32.773 4.02e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0117 K12164 - vvi:100266337 786.949