Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0116 ATGAATTCGCGAGAAGTCGCACTGGTCTCCGCAGCCACCATTTTCGGAGCCCTGGCCTCCACACTCGCGATTCGCTTCTTCTTCACCAACCCCAAAAACTACTTCTCTGGAAAGCACTCTTCTCAAAATGGTCAAAACGGCGTCGTTTCCACCAAGACCGCTCATTCTCAGAGCCCTTTCGACCCCTCAAAACGAAGAGGGTACTTGTCTTGGGATGATTATTTCATGGCAATTGCGTTTCTTTCAGCTGAAAGATCTAAGGATCCTAACAGGCAGGTTGGTGCATGCTTGGTGAGTCAAAATGGGGTGATTCTTGGCATTGGCTATAATGGGTTCCCAAGAGGCTGTTCAGATGACAAGCTCCCTTGGGCAAAGAAATCCAAAACTGGGGATCCTTTGGAGACGAAGTATCCTTATGTTTGTCATGCTGAAGTCAACGCCATCCTAAACACAAACCATGCATCTGCTGCTGGACAGAGGCTTTATGTGACCATGTTTCCTTGCAACGAATGTGCCAAGATAATCATTCAGTCAGGTGTCTCTGAAGTCATCTATTTTGTGGAGAAGAGGCTGAACAACTCACAAGTTGCATATATCGCCTCTCACAAACTTCTATCAATGGCTGGCGTAAAAGTGAGGAAACATCAACCACAGATGGATCAGATTTTGATCAAGTTTGAGGAGCTCTAG 690 0.4638 MNSREVALVSAATIFGALASTLAIRFFFTNPKNYFSGKHSSQNGQNGVVSTKTAHSQSPFDPSKRRGYLSWDDYFMAIAFLSAERSKDPNRQVGACLVSQNGVILGIGYNGFPRGCSDDKLPWAKKSKTGDPLETKYPYVCHAEVNAILNTNHASAAGQRLYVTMFPCNECAKIIIQSGVSEVIYFVEKRLNNSQVAYIASHKLLSMAGVKVRKHQPQMDQILIKFEEL* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0116 229 CDD deoxycytidylate_deaminase 72 185 IPR035105 -
Vvi17g0116 229 MobiDBLite consensus disorder prediction 38 62 - -
Vvi17g0116 229 MobiDBLite consensus disorder prediction 38 60 - -
Vvi17g0116 229 SUPERFAMILY Cytidine deaminase-like 72 220 IPR016193 GO:0003824
Vvi17g0116 229 Pfam Cytidine and deoxycytidylate deaminase zinc-binding region 70 186 IPR002125 -
Vvi17g0116 229 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 70 212 IPR002125 -
Vvi17g0116 229 ProSitePatterns Cytidine and deoxycytidylate deaminases zinc-binding region signature. 142 175 IPR016192 GO:0008270|GO:0016787
Vvi17g0116 229 FunFam Deoxycytidylate deaminase 61 229 - -
Vvi17g0116 229 PANTHER DEOXYCYTIDYLATE DEAMINASE-RELATED 48 228 IPR015517 -
Vvi17g0116 229 Gene3D Cytidine Deaminase, domain 2 62 229 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0116 K01493 - vvi:100261131 464.536