Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0114 ATGGCGGGAATCGGGAACCCTAAACCTAATCTCAACAGCGACACTGCGAAGAAGATGGCGAAGAAGAAGAAGAGTAATAATGGAGAGTTCGAGTTCTGCAAGGTCTGCAATCTCAATCACAACCAAGGGCGGCGCCACAACTACTTCCCAAACCACACAAAGTCTCTCTCCTCCTTCCTTTCCAGGTTTCTCTCCAAACTTTCCGACGTCCGTTTCTCTCTGAAAGACCCTAGCCCTCTTCGCCCCGAACACGCTTCTCGGAACCGACTCTGGTGCATCTTCTGCGATGCCGACATCGACGAGCTCGGAAGCTCATTCGCTTGTAACAATGCAATTAATCACTTGGCGAGTTTGGATCATTTGAAGAATCTGAAGAGTTTTCTGTGGAAACATGGAGGTGGAATGGATCGGGTGGATTCTTTTAGGGTTTCCGAGGCAGACCTTGCTAAGTGGGAGAAAAAGTGTAAGCTGTTGAAGAGCACGGATGCATCATCTAGTGAAGGATCTTGCAGGCCTTTACTTGGCCCTTCAAATGATATCCACAATGAACTCAACTATGAAAATATAAATAATTTTGACAAAAATGTAGTCTACTCTCTTGAATCAAGTCTTTCAAATGGTGTTATGCCTTTACAATATCATACAAATGAGATATATCAGGTATCTCATTCAGAATTCTTTGGAGTTCCAAAGGTTGGCTCTCTCCTACACGATGTTACCTCTTTTTGGCCTGCGGAGACACATTCTAGCACAGATTTATGGAACTTGAAGGATTTGACAGTGGCTAATGGAGGGAGCAGTTCTCAGAGTTTGCAATATCTCACGCAAATATGTTCCAAGTCTCCTGAAGAAGCTGAAGGAAATGTGCATTCTGGTGCACCTCCTCCTTGGTTTGAAGCAACTGAAGGAAACAAGATCAATGTTCTGCAAAAACCAGGATTTGGTAGCCTCACTTCTCCAATCAACAAATCAGGAAAGTCCCATAAATTGAACCCCAAACGAGTGGGAGCTGCTTGGGCCGAAAGGAGAAAGATTGAGCTGGAGATGGAAAAGAGGGGGGAGATCGTCACCAGTAACTGTGATGTTAACTGGCTTCCCAATTTTGGTAGGGTTTGGCAATCAGGCAGCCGTAAGGAATCAAGGAAAGAATTTGAGACGGAGAAGCAGAAATTACCCAAGGTTGAAAATCAGTCTGATTTATCTATCAAGATTCAGCCTTATATCAGCAAAAGAATGCGAAGAGATGTAAATGACTGA 1257 0.4415 MAGIGNPKPNLNSDTAKKMAKKKKSNNGEFEFCKVCNLNHNQGRRHNYFPNHTKSLSSFLSRFLSKLSDVRFSLKDPSPLRPEHASRNRLWCIFCDADIDELGSSFACNNAINHLASLDHLKNLKSFLWKHGGGMDRVDSFRVSEADLAKWEKKCKLLKSTDASSSEGSCRPLLGPSNDIHNELNYENINNFDKNVVYSLESSLSNGVMPLQYHTNEIYQVSHSEFFGVPKVGSLLHDVTSFWPAETHSSTDLWNLKDLTVANGGSSSQSLQYLTQICSKSPEEAEGNVHSGAPPPWFEATEGNKINVLQKPGFGSLTSPINKSGKSHKLNPKRVGAAWAERRKIELEMEKRGEIVTSNCDVNWLPNFGRVWQSGSRKESRKEFETEKQKLPKVENQSDLSIKIQPYISKRMRRDVND* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0114 418 Pfam Coiled coil protein 84 32 390 IPR028015 -
Vvi17g0114 418 PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 84 19 415 IPR028015 -
Vvi17g0114 418 MobiDBLite consensus disorder prediction 1 20 - -
Vvi17g0114 418 MobiDBLite consensus disorder prediction 375 394 - -
Vvi17g0114 418 Coils Coil 377 397 - -
Vvi17g0114 418 MobiDBLite consensus disorder prediction 375 398 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0114 - - vri:117904471 822.002