Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0110 ATGGGCCTTGGGGCATACCCGTGTACTGATGAGTTATCACTTCAAATGCTTGGAATGCGTGGAACTGTTTATGCCAATTATGCTGTGGATGAATCTGATTTGTTTCTTGCTTTTGGAGCTGGGTTTGATGACCGTGTGACAGGCAAGCTCGAAACTTTTGCTAGGCATGCTAAAATTGTTCACATTGACATAGATTCGTCATTGGGAAGAATAAGCAACCCCATGTGTCAGTTTGCGCAGATTTGA 246 0.435 MGLGAYPCTDELSLQMLGMRGTVYANYAVDESDLFLAFGAGFDDRVTGKLETFARHAKIVHIDIDSSLGRISNPMCQFAQI* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0110 81 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 1 67 IPR045229 -
Vvi17g0110 81 Pfam Thiamine pyrophosphate enzyme, central domain 1 67 IPR012000 GO:0000287|GO:0030976
Vvi17g0110 81 SUPERFAMILY DHS-like NAD/FAD-binding domain 1 67 IPR029035 -
Vvi17g0110 81 Gene3D - 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0110 Vvi-Chr17 942042 942287 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0110 K01652 - vvi:100243927 142.124