Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0108 ATGGCACAACCGGCGATTCCAGTGACACCGGCGTTGAAGGACGATCTGGACATAGTGATTCCCACCATCAGGAACCTGGATTTCTTGGAGATGTGGAGGCCATTTTTCCAGCCATACCATCTGATAATCGTACAGGACGGAGATCCGACGAAGACGATTCGGGTTCCGGAGGGGTTCGACTACGAGCTCTACAACCGGAACGACGTGAATCGGATCCTGGGACCCAAGGCAAGCTGTATCTCCTTCAAGGACTCCGCTTGTCGCTGCTTCGGCTTCCTCGTTTCCAAGAAGAAGTACATCTTCACCATTGATGATGACTGCTTTGTGGCTAAGGATCCGAGTGGGAAGGAGATAAATGCATTGGCGCAGCACATACAGAACTTGCTGACACCGTCGACTCCCTTCTTCTTCAACACCCTGTATGATCCTTTCAGGGAAGGAGCTGATTTTGTTCGGGGATACCCATTTAGCTTGAGGGAAGGAGCCCCAACTGCTATATCTCATGGGCTGTGGCTCAACATCCCTGATTATGATGCCCCAACTCAGCTTGTCAAGCCTCTCGAGCGCAACACCAGTTCACTCAGGTATGTGGATGCTGTTATGACCATCCCAAAAGGAACTCTATTTCCAATGTGTGGCATGAACCTTGGATTCGACCGGGAACTCATAGGTCCTGCTATGTACTTTGGGCTTATGGGTGATGGCCAACCAATTGGCAGATACGACGATATGTGGGCTGGATGGTGTGCGAAGGTGATCTGTGACCATATGAGTCTTGGTGTGAAAACTGGGCTGCCATACATTTGGCACAGTAAGGCGAGCAACCCATTTGTCAATTTGAAGAAAGAATACAAAGGAATATACTGGCAAGAAGACATCATCCCATTCTTCCAATCTGTTGTCTTCCCAAAAGAATGCATAACTGTGCAGCAATGCTACATTGAGCTTTCTAAGCAGGTCAAGGAGAAGCTGGGGCATGTTGATCCTTACTTCCAGAAACTCGCAGATTCCATGGTTACGTGGATTGAAGCCTGGGAGGAGCTAAACCCTCCAACAAAAGCAGCACCTGCAGCTCAGCCCAATGGTGTTAAGAAGGATGCACCGGCTCCCAAACCCAAGTAG 1122 0.4947 MAQPAIPVTPALKDDLDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIRVPEGFDYELYNRNDVNRILGPKASCISFKDSACRCFGFLVSKKKYIFTIDDDCFVAKDPSGKEINALAQHIQNLLTPSTPFFFNTLYDPFREGADFVRGYPFSLREGAPTAISHGLWLNIPDYDAPTQLVKPLERNTSSLRYVDAVMTIPKGTLFPMCGMNLGFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCAKVICDHMSLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEDIIPFFQSVVFPKECITVQQCYIELSKQVKEKLGHVDPYFQKLADSMVTWIEAWEELNPPTKAAPAAQPNGVKKDAPAPKPK* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0108 373 PIRSF UPTG 6 353 IPR004901 GO:0016866|GO:0071669
Vvi17g0108 373 Pfam Reversibly glycosylated polypeptide 13 349 IPR037595 -
Vvi17g0108 373 MobiDBLite consensus disorder prediction 352 373 - -
Vvi17g0108 373 SUPERFAMILY Nucleotide-diphospho-sugar transferases 16 225 IPR029044 -
Vvi17g0108 373 PANTHER UDP-ARABINOSE MUTASE 9 353 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0108 Vvi-Chr17 928898 931439 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0108 K13379 - vvi:100250902 778.474