Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0105 ATGGACGGAGAGGAGTTGACGGAGCAAGAAACTGCGTTGTATGATCGCCAAATTAGGGTTTGGGGCGTCGATGCCCAACGCAGATTGAGCAAAGCCCATATCTTAGTCAGTGGAATGAAAGGCACTGTTGTTGAGTTTTGCAAGAACATTGTTCTAGCTGGAGTTGGGAGTTTGACATTGGTGGATTCCCGGGAAGTGACTGAAGAAGCACTTTCTGCAAATTTCTTAATTCCTCCTGATGAGAATGTGTATAGCGGGAAAACTCTTGCTGAGCTGTGTTGTGATTCTTTGAAAGATTTCAATCCAATGGTTCGGGTTTCAGTTGAAAAAGGTGATATATCAAGCTTTGGTGGAGATTTCTATGACAGATTTGATGTTGTAGTCATCAGTTCTTGCTCCTTTGCAACAAAAAAATTGATCAATGAAAAGTGCCGAAAGGTATCAAAGCGCATTGCATTTTATACAGTTGATTGCAGAGATTCCTGTGGTGAAATATATGTTGATTTGCAGAACTATACTTATTCAAAGAAAAAACTTGATGAGACTGATGAATGCCAGTTACAGTATCCAAGTTTTGAGGAAGCAGTTACAATACCGTGGAGAGCACTTCCCAAAAAAGTCACAAAGCTATACTTAGCTATGAGAGTAATTGAGAGGTTTGAAGAAGCTGAGGGTCGGAATCCAGGAGAAATTTCAATTGCAGACCTTCCTGGTGTTCTGAAGCTGAAGAAGGAACTTTGTGAGGCACAATCATTCAACGAATCCCATGTTCCTGATGCTCTCCTAGAGAGATTAGTATCCGATACAAGTGAATTCCCTCCGGTTTGTGCCATCCTTGGAGGAATCCTAGGACAGTTCTTATTATGA 867 0.4129 MDGEELTEQETALYDRQIRVWGVDAQRRLSKAHILVSGMKGTVVEFCKNIVLAGVGSLTLVDSREVTEEALSANFLIPPDENVYSGKTLAELCCDSLKDFNPMVRVSVEKGDISSFGGDFYDRFDVVVISSCSFATKKLINEKCRKVSKRIAFYTVDCRDSCGEIYVDLQNYTYSKKKLDETDECQLQYPSFEEAVTIPWRALPKKVTKLYLAMRVIERFEEAEGRNPGEISIADLPGVLKLKKELCEAQSFNESHVPDALLERLVSDTSEFPPVCAILGGILGQFLL* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0105 288 Gene3D - 1 288 - -
Vvi17g0105 288 Pfam ThiF family 14 151 IPR000594 -
Vvi17g0105 288 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 7 285 IPR035985 GO:0008641
Vvi17g0105 288 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 9 284 IPR045886 -
Vvi17g0105 288 FunFam SUMO-activating enzyme subunit 1B-2 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0105 Vvi-Chr17 914313 918405 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0105 13 169 EF-hand Containing Proteins AT2G30110 35.185 1.16e-18 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0105 K10684 - vvi:100268076 571.237