Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0102 ATGGCGAGTCTGCTTCGAGTTTGCAGAAAAGCCCTAACCTCCACGGCCACGGCTCAGCCGCTTCTCTGGAGGGGATACGCAGTCGAATCCGCGGCAGCGATACGAGAATCTCCGGATCGAGTGAAATGGGACTACAGAGGACAGAGAAGGATAATTCCGCTGGGGCAGTGGCTCCCGAAGATCGCCGTCGACGCCTATGTGGCTCCCAACGTCGTTCTCGCCGGCCAGGTCACCGTAGGGGACGGATCGTCCGTTTGGAACGGCTCCGTTCTTCGCGGCGATCTCAACAAGATCACCATTGGGTTTTGCTGTAATATTCAGGAGAGGTGTGTTATCCACGCTGCTTGGAATTCTCCTACAGGATTACCAGCACACACATTCATCGAGAGGTATGTGACAGTTGGTGCATCCAGTCTGTTGCGGTCTTGCACGATCGAACCTGAGTGCATTGTTGGGCAACACTCCATCCTTATGGAAGGTTCTTTGATGGAGACCCACTCTATCCTTGAAGCTGGATCTGTTCTTCCCCCAGGAAGAAGAATACCAACGGGTGAACTATGGGCTGGGAACCCAGCAAGGTTTGTCCGAACTCTGACCCATGAAGAGACCCTAGAGATCCCTAAACTTGCTGTCGCTATCAATGACCTGAGCACAAGCCATTTCTCAGAGTTCCTCCCTTACTCAACAGCATACCTGGAGGTCGAGAAGCTGAAGAAGTCCTTTGGGATTTCAATTTGA 738 0.5271 MASLLRVCRKALTSTATAQPLLWRGYAVESAAAIRESPDRVKWDYRGQRRIIPLGQWLPKIAVDAYVAPNVVLAGQVTVGDGSSVWNGSVLRGDLNKITIGFCCNIQERCVIHAAWNSPTGLPAHTFIERYVTVGASSLLRSCTIEPECIVGQHSILMEGSLMETHSILEAGSVLPPGRRIPTGELWAGNPARFVRTLTHEETLEIPKLAVAINDLSTSHFSEFLPYSTAYLEVEKLKKSFGISI* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0102 245 Gene3D Hexapeptide repeat proteins 50 222 - -
Vvi17g0102 245 CDD LbH_gamma_CA_like 60 217 IPR047324 -
Vvi17g0102 245 PANTHER DYNACTIN SUBUNIT P25 25 244 - -
Vvi17g0102 245 SUPERFAMILY Trimeric LpxA-like enzymes 58 210 IPR011004 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0102 K01726 - vvi:100257801 495.738