Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0081 ATGCAAATGCTCAGAAGGCGTCTGAGGTTAATCTCTTCTTCAGATGAAGAAGAAGAAGAAGAACAGCAGCAAGCACCTGCTGCGAGTCACGAAGCTGTTACTCCAGTCTCTGCTAACCCTAACCCTAACACCTCTGAGCCTCTCCCAGTTGACATCTCCGATGATGATTTCGTCGACGTCTCCGAAAATTTCTCGACACCGTCTCCCCCACCTGCTCAAACTTCCGGCCAGTCCTTCCAGTCATCGTCCTTCGAACCGCCTAGTTCCGGCTCTATCTCCGGCGAAAGCTCCAATCCGATCGGCGACTTTCTTCGGGGGCTTGGGCTGTGTTTGCGGAGAGAATGGTTGGATTCTTGCATTCGCGGTCTCGAAAGCTCTGTTCCTGGCTTTGCGAGTTTGGATGTGGCTGGAAAAGCGAAGCTCTGTTTCGAGCAGTTTCTGTGTTCTGACATGAATTACTCTGGTGCCGGTGTTCTTCCCCAAAATGTTGATTCGATGCATCTTGTTGATCTCGCAGGGCCATTTGTGTTGCAGGTAGATGAGATAGTTAATATCAGTGCTCCTCTTCGAGGCAGGTATCAAAATGCAGCTTCTGGTATTAAAAGGTGCCTCAAATTGTCCATGACCGATGGTATTCAGCGTGTGTTTGGCATGGAGTACAGGCCTATCAAAGATATTGAAGTTTTGGCTCCTGCTGGATTGAAGATTGCCATCTGTAATGTAAATATACGACATGGACTTTTCATGTTGGTGCCTGAGGTTTTTGAGATTCTAGGAGGATCGGTTGAGGAGTTGGAAGCAGCACGACAAAGGCTGGTTCATGAAGTAAATAAACCACCTAGAGGGAAAAGAACAAAGAATGGTGTCGTTCCTCCTTTAGCAACTAGAGCTACTCTTGCAGCATGGCCATCAAGTGGTGTTGGTGTTTTTGGGCGCACAAATAGTTCCACATCCCAAGGTGCTACTCCATTTCAGGCGCATGATCATGGTGCTACTTCAGTTGCTCCTGGCATTGGTGTCAATGAAAGGTCTACAGAAGAGTTCAATGTTGCTGTTAGGAGGGAAAATGCTGTGCCTAATCCATCATCTAACAATGTTATGGTTGTTGAAGAGGTCGATATGGTTACTGATTCCATTGCTTCAGCGGCAGTCAGCAATGATACTGGTGAAAGGATGAGGGAAGAGCATACCGTTCCTGTTTGCAGGGACAATGCTGTGCCTAACCTGTCCTCTAATGCTGTTTCAGATGCTGCTGAGGTCCATATGGTTGCTGTTCCCATAACTGGGGAAAATGATGTACCTAACTCATCCCATAATGCTGTTTCTGATGTGGAGGAGATCCCTATGGTTGATGAGGCTGACCACCCACTGATACTAACTGGAGAGAGAGAGATCCCTTTCACTTACTTAGCTAGTTTGTCGGCCAAGTGGGCTGGAAGGAAGGAGAAAGCACCTTTTGTTCAGGGAAAAATTAAGTGCTTCTTGACTGGTGTAAAGGGATTCCAATATAAGCAAAGGACTACATTTGATCTTCGGGTTTATGTTGATGATGGTAGCCTCATCTCTGAGATCCTTATTGATCACAATGTTGTACAGCAAGGAATAGGTTATTCTCCTAAGGAGGTCACTGCTGCTCTTGCTTCTTCAGACGTGAAAATAGTTAGTGGCATGAAGGACACCCTGAAACAGTTCCAAATTTTCTTAGCGAATTTTGAGGGTACAATGGTTGTAGAGATAAATGAAACCTCCCCTCTTCCAATTGCCCTTGAGATGGTGCAGGGCTGTCCAGCATCTGATGCATGGTTGCTTCTGAGAAGACTGAAGTCCTTCACTTCTATTCAAGCACCACGGAATTCCCCCTTGGAGCCCATTGATCTATCCCCTTGA 1887 0.4653 MQMLRRRLRLISSSDEEEEEEQQQAPAASHEAVTPVSANPNPNTSEPLPVDISDDDFVDVSENFSTPSPPPAQTSGQSFQSSSFEPPSSGSISGESSNPIGDFLRGLGLCLRREWLDSCIRGLESSVPGFASLDVAGKAKLCFEQFLCSDMNYSGAGVLPQNVDSMHLVDLAGPFVLQVDEIVNISAPLRGRYQNAASGIKRCLKLSMTDGIQRVFGMEYRPIKDIEVLAPAGLKIAICNVNIRHGLFMLVPEVFEILGGSVEELEAARQRLVHEVNKPPRGKRTKNGVVPPLATRATLAAWPSSGVGVFGRTNSSTSQGATPFQAHDHGATSVAPGIGVNERSTEEFNVAVRRENAVPNPSSNNVMVVEEVDMVTDSIASAAVSNDTGERMREEHTVPVCRDNAVPNLSSNAVSDAAEVHMVAVPITGENDVPNSSHNAVSDVEEIPMVDEADHPLILTGEREIPFTYLASLSAKWAGRKEKAPFVQGKIKCFLTGVKGFQYKQRTTFDLRVYVDDGSLISEILIDHNVVQQGIGYSPKEVTAALASSDVKIVSGMKDTLKQFQIFLANFEGTMVVEINETSPLPIALEMVQGCPASDAWLLLRRLKSFTSIQAPRNSPLEPIDLSP* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0081 628 PANTHER RECQ-MEDIATED GENOME INSTABILITY PROTEIN 1 RMI1 96 609 - -
Vvi17g0081 628 MobiDBLite consensus disorder prediction 27 48 - -
Vvi17g0081 628 MobiDBLite consensus disorder prediction 1 97 - -
Vvi17g0081 628 Gene3D - 150 276 IPR042470 -
Vvi17g0081 628 FunFam RecQ-mediated instability protein (DUF1767) 150 276 - -
Vvi17g0081 628 SMART DUF1767_2 101 194 IPR033472 -
Vvi17g0081 628 Pfam Recq-mediated genome instability protein 1, C-terminal OB-fold 466 607 IPR032199 GO:0000166
Vvi17g0081 628 Pfam RecQ mediated genome instability protein 109 270 IPR013894 -
Vvi17g0081 628 MobiDBLite consensus disorder prediction 59 97 - -
Vvi17g0081 628 MobiDBLite consensus disorder prediction 313 337 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0081 K10990 - vvi:100244067 1136.32