Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0074 ATGGATTCTGTAAAGGGGAAAGGGAAGAAAAATATGGCGGTCAAGGCATGGGAGCGATGCCGGGTCATATGTCGCGGAGCCAAGAAGTCGGCAGTGTACCCATTTAGCCCTTGGAGTTCTTTCTCAGAGAGCAAACCCTCAAAGCGATCAGAAGTTGATAAGCCTAAAACAAAGTACCCAGTGCCTCCCAAAGGTTACTTCCCAGTCTACGTTGGAGCCCGGAAACAGCGGTTCGTGATCAAGACCCAGTTTGCTAACCACTCACTATTCCAGATGCTGCTAGAGGAGGCTGAACAGGAATATGGATAA 309 0.4919 MDSVKGKGKKNMAVKAWERCRVICRGAKKSAVYPFSPWSSFSESKPSKRSEVDKPKTKYPVPPKGYFPVYVGARKQRFVIKTQFANHSLFQMLLEEAEQEYG* 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0074 102 Pfam Auxin responsive protein 51 102 IPR003676 GO:0009733
Vvi17g0074 102 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 47 102 IPR003676 GO:0009733
Vvi17g0074 102 MobiDBLite consensus disorder prediction 35 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0074 Vvi-Chr17 675326 675634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0074 60 102 Calmodulin-binding Proteins AT3G43120 60.465 4.55e-13 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0074 K14488 - vvi:100854437 194.897