Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0067 ATGAATGGAATATTTAATGAGCAGATTTTGGTTGAGAAGCTAGCCAAACTCAATAGCTCACAAAAGAGCATAGAGACTTTATCACACTGGTGCATTTTCCATAGGAAGAGAGCAAAACAAGTTGTTGAAACATGGGAAAGACAGTTCCATTGCTCCCTGAGGGAGCAGCGACTCTCCTTTCTATATCTTGCAAATGATATTTTGCAGAATAGTAGGCGAAATGGTTTGGAGTTTGTTGGTGAATTTTGGAAGGTTCTTCCAAATGCTCTTCGTGATGTAGTAGAAAGTGGAGATGATTTTGGGAAAAATGCTGTGCTGCGACTGATTAATATATGGGATGAGAGAAAGGTATTCGGTTCTAGGGGGCAAATTCTCAAAGAAGAGCTCATGGGGAAGACTGTGGAGAATAATGATAAAAATAATAATAACAATTCATATAGCAAGAACTTGAGCTTTAGACATAAACATCCTTTCCAAGCTGCAGTGGAAAAAATCATTTCAAGTTATGAAAATGTATATGGTAGTCCATTGGATGAAGAAACTCTATTGAGCAAATGCAGGAGCGCTATTGGTTGCATTGAGAAAGCAGAGAAGGAGATTGGTGGTGATTACAGCTCAGGGCAATTCAATGGATCTAAATATGTTGAGGAGTTGCAAGGGCAGCATGACATACTGACAGAATGTATCGAGCAACTGAGAACAGCTGAATCATCAAGAGCAAGTCTCGTGTCTCATTTGAAGGAGGCTCTCCAAGAGCAGGAATTCAAGCTGGATCAAGTTCACAATCAACTTCAGGTTGCCGAGTCACAATCAGCACATATAAGCAGCATTCGGCAACAATTGCTGAACTGCAACAGAGGTCATATGACAGCAGAGCAGAGGGATGTTAACGCTCATGCTGAGGCACCTTCCACTTTCACTCCAGAAACTCCAGCCACTGGTGGAGACAAGGAACAATCAGCTCCGGTAATGTACACAAGGGAGGAATCTTTCACTGGTAAGTCTTCTTCCCGCTTTGAAGAAGATCCACGGAAATCTGCAGCTGCTGCTGTGGCAGCAAAGCTTGCAGCTTCAACCTCCTCGGCCCAAATGCTATCCTATGTGTTCTCCTCTCTGGCGTCAGAATCGGCGGATGGAAATCCAAAGGAAGAATCTCCTGATGCTCTTCCTTTTGAGAAAAGGCCAAAACTTGAAAACCTTCCTTTTTCCTACTTCCCACCTCAGCATTCCCAACAACCACCACTTCCCCCTTTTCCCCATCCTGATTCGCTCCAAAACAAGGCGACAGCTACCTCGCAAATGCCTCCGCAGCAGCCACCTCCCCAACTGTCCCCTCAGGTGTCACATCCAGATCTGGCCATGCATCAGGCAGCACCACCTCCGCTACCAACTCTCCCACAGCTAGCCACGCCACCATTTATGCAGACAGCTGGATCTATGATAGGTGCACCGTACAACTATACACCACCACTGCCTCCACCTCCTGGCTTTTCAATACCTAGAACCCCACTAACTGCTGTCCCTTATCCTTCTCCGCCGATTCCATACCAGAATTTTCAGGGGCCAGAAGGTTTCTTCAGTCAGCCGCCCATACCAGCAACACCTCCAATTTCGAGGTCCTAG 1623 0.4572 MNGIFNEQILVEKLAKLNSSQKSIETLSHWCIFHRKRAKQVVETWERQFHCSLREQRLSFLYLANDILQNSRRNGLEFVGEFWKVLPNALRDVVESGDDFGKNAVLRLINIWDERKVFGSRGQILKEELMGKTVENNDKNNNNNSYSKNLSFRHKHPFQAAVEKIISSYENVYGSPLDEETLLSKCRSAIGCIEKAEKEIGGDYSSGQFNGSKYVEELQGQHDILTECIEQLRTAESSRASLVSHLKEALQEQEFKLDQVHNQLQVAESQSAHISSIRQQLLNCNRGHMTAEQRDVNAHAEAPSTFTPETPATGGDKEQSAPVMYTREESFTGKSSSRFEEDPRKSAAAAVAAKLAASTSSAQMLSYVFSSLASESADGNPKEESPDALPFEKRPKLENLPFSYFPPQHSQQPPLPPFPHPDSLQNKATATSQMPPQQPPPQLSPQVSHPDLAMHQAAPPPLPTLPQLATPPFMQTAGSMIGAPYNYTPPLPPPPGFSIPRTPLTAVPYPSPPIPYQNFQGPEGFFSQPPIPATPPISRS* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0067 540 MobiDBLite consensus disorder prediction 298 341 - -
Vvi17g0067 540 SUPERFAMILY ENTH/VHS domain 11 117 IPR008942 -
Vvi17g0067 540 Gene3D - 3 131 IPR008942 -
Vvi17g0067 540 MobiDBLite consensus disorder prediction 407 421 - -
Vvi17g0067 540 MobiDBLite consensus disorder prediction 398 467 - -
Vvi17g0067 540 Pfam CID domain 9 120 IPR006569 -
Vvi17g0067 540 CDD CID_RPRD_like 7 130 - -
Vvi17g0067 540 Coils Coil 215 235 - -
Vvi17g0067 540 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 1 515 - -
Vvi17g0067 540 ProSiteProfiles CID domain profile. 2 134 IPR006569 -
Vvi17g0067 540 Coils Coil 243 270 - -
Vvi17g0067 540 SMART 558neu5 9 130 IPR006569 -
Vvi17g0067 540 MobiDBLite consensus disorder prediction 511 540 - -
Vvi17g0067 540 FunFam ENTH/VHS family protein isoform 1 2 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0067 Vvi-Chr17 569936 579943 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0067 K15559 - vvi:100250806 986.867