Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0066 ATGGTTTCAGTGGAGAATTCTTCTACCGATCCAAATCTTTTCCTCACGAATAGGCTTGGAGATATTCGAGCATATTCATATTCTTTAGCGTCATTCACTCTCCAATGGAGGGACCTGGAGGAGTTGTTCGAGTCAATTCAGTTGTCCGTCGACGACTGCTTCAACGATATCCAACTGAGACAGAAGCAAATCACCGAAGCATTATCTTCATCAGTCCCATCTCAGCCTCGGCCGGAGTTGAAGTATCTCTGCCTTAACATGGACGGTAAGGGCTTGAGATCGTTCCTGATTGAGAAAACAAAGGCGCGTCCACCGTTCTCGATCGGAGACGAAGTCTCGGCCGCCCTTTTATCTGCTCCCGATCCGGCAATGCTTGTGCTGGATGCAGTGGATGGCTTTTACCCGCGAAAATCTAAATCTAAGGGAAAGGATAAGCGCAGCGAATTGGTTGATATCAGAAGGACCTGTGTTCTTCTGTTGGAGCAGTTGATGAAAATCTCCCCACGAATTGGTCCTGCTGTGACTGCGAAAGCCAAGAAATTGGCAATTGAATGGAAAGCGAAAATTAATGGGGAAAACGATAATTCATCGAGGGTGTTAGGCCTTTTGCTGCTCTTAGCTGCGTATGAATTGGGCTGTGTATTTCAATTGAATGTGTTGTTTGATCTTTTCGAGATGGTTCCTCTGCACCACCAGGCTTCCGAGTTGTATCGGAGGCTTGGGCTCATGGATAGGGTTTCTGATTTCATTCAAAATCTTATTACAAAGAGGAAGCAAATAGAAGCTATTAAGTTTATATATGAATTTGGGTTGGTTGACAAGTTCCCACCATTCCCCTTGTTAAGAGCCCACTTGCAGGATGCCAAGAGGGCTCACAAAAAGGCTACAAAGGAAGCCGACTCACGTCAATCAAAGGATGAGGCCTTTGACAAAGAAATAGCTGCAGTTAAAGCTGTGATCAGTTGCGTCAAGGATCATAAGATCGAGTGCAAGTACACGAGCAAAAATCTGGGAAAACGAATAAATCAGTTAAAAGCCCTGAAGAGAAGCAGAGAAAAAGAGATTGAAGGAGGTAAGGACTGTACCAGGACAGCACCTCAGGCTCAACAACAGCATCACAATAAAAAGAAGAGACTCCGGGCAGATCCAGCTGCAAACAGCAATCCCAAATAG 1173 0.4518 MVSVENSSTDPNLFLTNRLGDIRAYSYSLASFTLQWRDLEELFESIQLSVDDCFNDIQLRQKQITEALSSSVPSQPRPELKYLCLNMDGKGLRSFLIEKTKARPPFSIGDEVSAALLSAPDPAMLVLDAVDGFYPRKSKSKGKDKRSELVDIRRTCVLLLEQLMKISPRIGPAVTAKAKKLAIEWKAKINGENDNSSRVLGLLLLLAAYELGCVFQLNVLFDLFEMVPLHHQASELYRRLGLMDRVSDFIQNLITKRKQIEAIKFIYEFGLVDKFPPFPLLRAHLQDAKRAHKKATKEADSRQSKDEAFDKEIAAVKAVISCVKDHKIECKYTSKNLGKRINQLKALKRSREKEIEGGKDCTRTAPQAQQQHHNKKKRLRADPAANSNPK* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0066 390 MobiDBLite consensus disorder prediction 349 390 - -
Vvi17g0066 390 Coils Coil 285 305 - -
Vvi17g0066 390 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 43 378 - -
Vvi17g0066 390 Pfam Frigida-like protein 74 355 IPR012474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0066 Vvi-Chr17 563888 567370 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0066 - - vvi:104882370 748.814