Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0065 ATGGAATCTGATTCTGCTCGGAGCTCAGGTCTTTCTTGGATTCTCAGTCCTCTGATGATGAGATCCACCGCCCCTCGAAGGCGTCGTCTCTCCGTTCTGGGACTCCTCCTCTGCTGTACGATTCTCACATTCTACACTCTCTTACTCCTCAGCCTCACTGCCGTTGTGCCTTCGCCGGAGCTCAGTTTTCCAGGAACTTTGCTGGAGACCAGCCTTCCGGTGGCGTCTCCGGAGATTCCGACTGAGGATGTCCAGAGTGCGAACTCAACTTCTCCGACCAAAGGCTCGGCGGAAATTCAGCGCCGCAAAATGCAGAAGGAGCTTCCGTGCGCGACAGTGGAAGAAATGGGGGAGGCGTTTGGGCACGTGTCTTGGAAGGAAAGCCTCAAAGTTAGGCGGTTGATTCGAGATCATTTCGCTTTGCACGGAGCTTCTAGAGTCCGAGAACTCCCACCTGAGCAGTTTTGCAAACAAGGTTTTGTGATTGGTAAAGCATCACAGGCAGGTTTTGGGAATGAAATGTACAAGATCTTAACCTCTGCGGCATTGAGTATTATGTTAAACCGTTCACTCATCATCGGGCAAACCAGGGGCAAATATCCATTTCAAAACTACATTTCTTACACAGACCTTTCCTTTACTATGAATGAAGTGAAGCATCTCTGGAGACGAAATGACTGTGTTGGTAAGTATGGAAGGCATCTGGTTATGAGGACAGATGATTTTGAGAAGCCTACAGAAACAAATGTCCTTTGCAGTAATTGGAGAAAATGGAAACAGCCGATCATATGGTTCAAAGGTACAACTGATGCTGTGGCAGCTCAGTTTTTCTTGAAGAACATACATCCTCAGATGAGGAAGGCTGCTTCTACATTATTTGGGAAACCAGGGTATCTTCAATCTAGGCCTAATACATTTGGGGAGCTGATGAGAGCTATCATATCTCCTTCAGAAAATGTCCAAGAAGCTGTGAATTGGACCCTTAGGGGAGGTCCGGATCCTCATATTACATTGCACATGCGCATGCTGATGAACAAGTCTCCAAGAGCAGTAAATTCAGCATTAAGTTGCATTCAGAAGACCCTGTTCAGTAATCACCTAAAAGTGCCAAGGCCTCGTGTGGTTTTGGTCTCAGATACACCTTCTCTTATTAAAGACATTACACCAAAACTGAAGGAATTTTCTGAGGTTGTTCATTTTGACTACAATCTTTTCAGTGGAAAAATTTCAAGGGGAAAAGTAAATGATCTGCGTCAGTCAGAGTTTAGGGTGAAAGATTGGGGATCAGCACCTAGGTGGGTTGCATTTGTGGACTTCTTTCTTGCTTCACTGGCTAAACATGCTGTTGTTTCAGGCGCCCAAAGGCGTGTTGGAACTACCTATGCACAGCTAATTGCAGCACTGGCAGCAGCTCACCAACTTGGTATGCTTACACCATTCAGTGCTGCTGCATTACTTTAA 1461 0.4613 MESDSARSSGLSWILSPLMMRSTAPRRRRLSVLGLLLCCTILTFYTLLLLSLTAVVPSPELSFPGTLLETSLPVASPEIPTEDVQSANSTSPTKGSAEIQRRKMQKELPCATVEEMGEAFGHVSWKESLKVRRLIRDHFALHGASRVRELPPEQFCKQGFVIGKASQAGFGNEMYKILTSAALSIMLNRSLIIGQTRGKYPFQNYISYTDLSFTMNEVKHLWRRNDCVGKYGRHLVMRTDDFEKPTETNVLCSNWRKWKQPIIWFKGTTDAVAAQFFLKNIHPQMRKAASTLFGKPGYLQSRPNTFGELMRAIISPSENVQEAVNWTLRGGPDPHITLHMRMLMNKSPRAVNSALSCIQKTLFSNHLKVPRPRVVLVSDTPSLIKDITPKLKEFSEVVHFDYNLFSGKISRGKVNDLRQSEFRVKDWGSAPRWVAFVDFFLASLAKHAVVSGAQRRVGTTYAQLIAALAAAHQLGMLTPFSAAALL* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0065 486 PANTHER EXPRESSED PROTEIN 24 475 - -
Vvi17g0065 486 MobiDBLite consensus disorder prediction 81 98 - -
Vvi17g0065 486 MobiDBLite consensus disorder prediction 78 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0065 Vvi-Chr17 559339 562728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0065 - - vvi:100267986 895.575