Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0064 ATGCCCCTTCTGCATCAATCCTCAAATTGTGAGCTTGTAGAAGAAAAACCCCTTCTGCATTCTGTCCTTGCCCACCTCCCAGCTGAAGAGATGGCCTTGTTTCCCATTCACCATCCTTTGGTTTTTATCTTCGGCATCCTAGGTAACCTCATCTCATTCATGGTGTACCTTGCTCCACTGCCGACTTTCTACCAAATTTACAAAAGGAAATCCACTGAAGGGTTTCAGTCTGTTCCCTACGTGGTTGCATTATTCAGTGCTATGCTTTGGATATACTATGCCTTCCTTAACACTGATGCTAGCCTTCTCATCACCATCAACTCCGTTGGCTGCGTCATTGAGACCAGCTACATTGTTATGTTCCTTGTGTATGCACCGAAGAAGGCTAGGATCACGACTGTGAAACTCGTTTTTCTAATGAATATCTGCGGATTCGGTTCCATCCTGCTCCTAACCCTCCTCCTAGCTGAAGGCGCTAACCGTGTCCGTATTCTTGGATGGGTTTGTCTCGTGTTCTCGCTAAGCGTTTTCCTTGCACCCCTTTGCATCATGAGACAAGTTATCCGAACCAAGAGCGTTGAGTACATGCCATTTCTTCTATCTTTTTTCCTCACATTGAGTGCTGTAATGTGGTTCTTTTATGGTCTGATGCTCAAAGACTTTTACATTGCTGGTCCAAACATCCTGGGCTTCGTCTTCGGGATTGTTCAGATGGTCCTCTACTTAATCTACAGAAACAGGAAGAAAGTTCTGGAAAACGAGAAATTGCCTGAACTATCCGAACAAATCATTGACGTTGTGAAGCTTAGCACAATGGTGTGCTCAGAAGTGAACCTAACTAACCAGCAGCACAGCAATGAAGGACATGGCACCACAGGCCTTGAAGTCATAGTTGCTCTGTAA 903 0.4507 MPLLHQSSNCELVEEKPLLHSVLAHLPAEEMALFPIHHPLVFIFGILGNLISFMVYLAPLPTFYQIYKRKSTEGFQSVPYVVALFSAMLWIYYAFLNTDASLLITINSVGCVIETSYIVMFLVYAPKKARITTVKLVFLMNICGFGSILLLTLLLAEGANRVRILGWVCLVFSLSVFLAPLCIMRQVIRTKSVEYMPFLLSFFLTLSAVMWFFYGLMLKDFYIAGPNILGFVFGIVQMVLYLIYRNRKKVLENEKLPELSEQIIDVVKLSTMVCSEVNLTNQQHSNEGHGTTGLEVIVAL* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0064 300 Pfam Sugar efflux transporter for intercellular exchange 43 129 IPR004316 GO:0016020
Vvi17g0064 300 Pfam Sugar efflux transporter for intercellular exchange 164 249 IPR004316 GO:0016020
Vvi17g0064 300 Gene3D - 37 126 - -
Vvi17g0064 300 FunFam Bidirectional sugar transporter SWEET 42 130 - -
Vvi17g0064 300 Gene3D - 160 256 - -
Vvi17g0064 300 PANTHER RAG1-ACTIVATING PROTEIN 1 46 257 IPR047664 -
Vvi17g0064 300 FunFam Bidirectional sugar transporter SWEET 161 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0064 Vvi-Chr17 551002 552646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0064 40 295 Miscellaneous Gene Families AT5G50790 56.923 2.23e-103 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0064 K15382 - vvi:100267921 529.635