Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0063 ATGGCCATGTTCACAGTTGGTCACCATCCATGGGTGTTTGCCTCTGGGATTCTAGGTAACCTCATGTCATTCTTGGTGTATCTTGCTCCTATACCGACATTTACTAGGGTTATTAAGAAGAAATCCACAGAAGGGTTTCAATCGGTTCCTTATGTTATTGCGCTGTTCAGCGCAATGCTTTGGATGTACTACGGATTGGTTAATACGAACGCATCCTTTCTCCTCTCCGTCAACGGGTTTGGTTGTTTTATAGAGATTATTTACATCAGCATCTACCTCATTTTTGCGCCAAGGCGAGCTAGGATCCTAACTCTAAGGCTACTTCTTCTAATAAACCTTGGAGCATTTTGCTTGATTCTTATCGTTACCAACTTCATGGTAAAACGCCCACACCGTGTGAAAGCTGTTGGATGGGTGTGTCTCATATTCGCTGTGAGCGTATTCGCAGCGCCTTTGAGCATTATGAGATTGGTGATTCGAACCAAGAGCGTGGAGTTTATGCCGTTGCCTTTATCGATTTGCCTCACTCTAAGTGCAGTCGGGTGGTTCTTCTATGGCATCCTACAGATGGACTTATACATTGCGATGCCGAACACACTGGGTTTCGTCTTTGGGTTGATTCAGATGATACTCTACGCCATGTACAGGAACAGCACCCCCGTTACCAAAGAGCCGAAGCTGCCCGAACAAGTTATCGATATTGTGAAGCTAAACACTAACTCTACTCCTGAGGTACACCCGGTGTCCACCCTGCAGCCCAATTGTGTTGAAAATGAAGGCGGAAATGGTCAAAATGCGCGTAAGGAAACCGAGCATGCTGAGGAAAGCATGGGAGGATCGAACCGGGTTTGA 852 0.4613 MAMFTVGHHPWVFASGILGNLMSFLVYLAPIPTFTRVIKKKSTEGFQSVPYVIALFSAMLWMYYGLVNTNASFLLSVNGFGCFIEIIYISIYLIFAPRRARILTLRLLLLINLGAFCLILIVTNFMVKRPHRVKAVGWVCLIFAVSVFAAPLSIMRLVIRTKSVEFMPLPLSICLTLSAVGWFFYGILQMDLYIAMPNTLGFVFGLIQMILYAMYRNSTPVTKEPKLPEQVIDIVKLNTNSTPEVHPVSTLQPNCVENEGGNGQNARKETEHAEESMGGSNRV* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0063 283 MobiDBLite consensus disorder prediction 244 263 - -
Vvi17g0063 283 MobiDBLite consensus disorder prediction 264 283 - -
Vvi17g0063 283 MobiDBLite consensus disorder prediction 244 283 - -
Vvi17g0063 283 FunFam Bidirectional sugar transporter SWEET 132 224 - -
Vvi17g0063 283 Pfam Sugar efflux transporter for intercellular exchange 135 218 IPR004316 GO:0016020
Vvi17g0063 283 Pfam Sugar efflux transporter for intercellular exchange 16 99 IPR004316 GO:0016020
Vvi17g0063 283 FunFam Bidirectional sugar transporter SWEET 13 101 - -
Vvi17g0063 283 Gene3D - 12 99 - -
Vvi17g0063 283 Gene3D - 132 219 - -
Vvi17g0063 283 PANTHER RAG1-ACTIVATING PROTEIN 1 21 231 IPR047664 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0063 Vvi-Chr17 546502 548441 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0063 1 269 Miscellaneous Gene Families AT5G23660 52.837 2.98e-99 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0063 K15382 - vvi:100262834 541.576