Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0058 ATGGCGACGCCGAAAGAGCATATAGAAGAGATAAGGAGGACGAAGTTCTCGATCGGAGGAGAGCTGAATCCTCTGACGGAGGATCTTCACCAGGCGGTCAAGAATCTCTCTGCTGAGCTTTACGCTAAGGATGTTCATTTCCTCATGGAGCTCATTCAGAATGCAGAAGATAATGAGTACGGGGAAGGAGTGAATCCATCGCTGGAGCTAGTTATAACTTCACAGGACATAACAGACACTGGAGCACCGGCGACATTGTTGATTTTCAATAACGAGAAGGGGTTTTCAGCTAAAAACATAGAGTCTATATGCAGTGTTGGGAGGTCCACCAAGAAAAGCAACAGGAAGCAGGGTTATATTGGAGAGAAAGGAATTGGGTTCAAAAGTGTATTTTTGATCACAGCTCAGCCTTACATATTCAGTAATGGATATCAGATACGATTCAATGAAGAGCCTTGCTCGCACAGCAATCTTGGGTACATTGTCCCTGAATGGGTTGAGCAGAATCCAAGTCTTGCTGACATAAAACAAATATATGGTTCTCATGCTGTGCTTCCAACCACTACTATAATCTTGCCTCTAAAGCCAGACAAGATCAAACCTGTGAAGCAACAGCTCTCAAGTATTCAACCTGAAGTTCTATTATTTCTTTCAAAGATTAAGCAGTTTTCTGTCAAGGAAGATAACAAGGATCCAAGGCTCAATACAGTGAATGCTATATCTATTTCAAGTGAAATTAACTTTGTTACAAGGAAAAATATTGATGCTGATTCCTATACTCTCCATCTCTCCACGGATGAAGCTAGTGATGTGACTGAAAAAGAATGCAGCTATTATATGTGGAGGCAGAAGTTCCCTGTCAGGCAGGAAAATCAAGTAGAAAGAAGACTTGGAGTGGAGGAGTGGGTTATTAAGCTAGCATTTCCGATTGGACAGCGACTGAATAGGGGGATGAGCTCTCCTGGAATCTATGCATTTCTTCCTACGGAGATGGTTACAAATTTTCCTTTCATTATTCAGGCAGATTTTGTTCTTGCATCATCCAGGGAAACAATCCTCTTGGACAACAAATGGAACCAAGGCATTCTAGATTGTGTGCCTTCTGCTTTTCTTAATGCCTTTATTTCACTGGTTACAACATCAGAAGATGTTCCAGTTTCTACACTGACCCCAATGTTTAAGTTCTTACCTATCAACAGCTCTTCTTATCCAAAGCTCAATGTCGTGAGGGAGTCTATCAAAGCAAAACTGCTTACAGAGAATATCATACCGTGTGAGTCGTATTCAGACCAGAAGATCTTTCGTAAACCTTGTGAAGTGGGTAGGTTAATGCCTTCTTTCTGGAATATCCTGAAAAAGGCAAGGAAGCAAGGGGTAAGCTTGCATTCTCTATCATCCCATGGAAGGTATATCCTGAATTCTTCATTTGATACAGAGGAGCACGATCACATATTGAATTTCCTTGGTGTGGAACCTGTCAATAGCGAATGGTATGCCAAGTGTATCATGAGTTCCAAGCTTGTTTTGGGAGTGACAGAGGATGACTATTTGGAGCTTCTACTCTTTATTGCTGAGAAATGGAGTTTCTCGTTCTATAGCACTACTATGAAGTATGTGCCTCTCCTGAAATATGTTGGGCTTGACGGAAGGGTTGCTTTGTGTGCTATAAGCAACGTCACAATGCGGGATGGTGAAAGTATGATTTGTATGTCCCATGAGCCTCGGCATATCTCATGGATGATAGATTGGAACAGGGAATTTGGATTTATGACAGATCGATATTTTATGCCCAGAAGCACACAAGCAGCTATAATGTCATTTTTTAGGAGAGAGACTCTGTTGGAATGGCTTAAAATTCAAGTTAAGGTTCGTGTTGTAGGCATGTACAACTTTGCGGTCATTCTTTATAATTCTCTCAATGATGACCGACAGCTTGCAATTGCCTATGCTCACTTCCTTTATCATTCGTTCTCAAAGAGTTATCTACCAAAGGAGAAGGTTGATTATTTGTGTGGTATTATGCCACTTGTAGATAACTATGGGCATGTGATGAGACGAAGAAAAGGGGTTCTCGTCCCTGCCAATGGAAGCAAATGGGTGGGATTGATGGGTGCAAATCCGTGGAGGGAAGAAGGCTATGTTGAACTAGGAGAAGACTATTTGCGCTCAGGAAATTATGCAGGTTCATTCACCCCAGAAAGTCAGCTAATAACATTTCTCAAAACACATATTGCAGTTTCTGATATACCTGATATATCTCCTCCCAACGCTGAGTTATCTGTTGCAGATACACCACTCACCAAGAAAAATGCATTCTTGCTGTTGGACTGGATTCATAATCTGAATTATAAGGAAAATCTGCCTGCTAAGTTCTTGGCATCCATTCGGACAGGAAGCTGGCTCAAAATTTCCCTCAGTGACAGCCCTGGATACAGGCCACCATCACAGTCTTTTCTATTTGCTTCATCAGATGGAAATCTTCTTCAGGACGAGTCAGTGATGGTTGATATTCCATTGATTGACCAAGAATTTTATGGCAATGGCTTAAATAATTATAAGGAGGAGCTCAAAAAAATTGGAGTAATGTTTGAATATCGTGACATGTGTCAGTTTGCAGGGAAGCACGTAATGTCTCTTGCAACTTCCTCTGCATTGACCAAATCTAATGTGTTTCAAATACTTAATTTCATCAAATTTCTGCGGCTTAAAGTTCTTCCAGCTGATGAGTTCATCCAGACTATCAAGGATGGAAGATGGTTGAAGACTTCCTGTGGTCACAGGTCTCCAGTTGGATCTGTTTTATTTGACCAAGAATGGAAAGCTGCATCACAAATCAGTGACATCCCCTTCATCGACCAAGATCACTACGGCAAGGAAATCCTTCGTTTCAAAATGGAACTCCAATTGCTAGGTGTGGTAGTTGGCTTCAACAAAAATTACCAGCTTGTTACTGATCACTTAAAGTCTCAAGCATGCTCAAATCATCCAACAGCCGAGGCTATTCTTTTGATATTTGAATGCATGCGTGATTGTGAGCGCAATTCAAGACCAGCCGATAAACTTATACAGGCACTTAAAGGTAATAAATGCTTGAAGACGAACATGGGCTACAAGTTTCCTAGTGAATGTTTCCTGTTTAATACTGAGTGGGGCTGCCTTCTGAAAGTCTTCCATAATGATTTCCCACTTATTGATGAAGACTTCTATGGGACCACCATCTTTTCTTACAAAAGAGAGTTGGGGCAAGCAGGAGTAGTGGTAGATTTTGAGGCGGCAACCCAGAAATTTTCTCCTGTTTTCAAGAAACGTGCATCCTCATCTTCCATTGGAAGAGAACATGTTCTGTCTTTTCTCGCATCTTACAGACAGATTAATAAGACAAACAACAAGTTTCCTTCAGATTTTGTGTGCAGCATCTACGAGGCAAAATGGCTGCAAACACGCTTTGGTGATCCTAGATCTCCAAGAGAGTGCATTCTTTTTGGCCCGGAGTGGGAACCTGTAAGCTCAATTACTCTGCTTCCTTTCATTGATGACAGTGATAATTCCTACGGCAAGGGCATTCATGAATACAGAAAAGAGCTGAATAGCCTGGGCGTTACCATCAAATATAGAGATGGTGTGAGGTTTGTGGCTGCTGGTATCTGTTTTCCCCAAGATCCCAGCACTATAACTCCAGAAAGTGTGCTCTCTCTGCTGCAGTGCATAAAGATTTTACAGAAATATGATCCTCATTTACCTGACATTTTCCGGAAAAAGGTTTCCCAAAGTTGGTTAAAAACCTATTATGGGTATAGGTCTCCAGACCAAAGTTTGTTGTTTGGCTCTGAGTGGGGTTCTTTCTTACAGAGGAATGATGGGCCTTTCATTGATGAAGAATTCTATGGCCCCAACATTACAGCCTACAAGAACGAGCTCAGAGAAATAGGAGTGACCGTTGATGTGTCAAATGGGTGCTCTTTGCTTGCCGGCTACCTTGATTTTCATTCTGAATTTTCAACCATTGTTCGAGTCTATAATTACTTGAATAAACACAGCTGGTCGCCTCACAGAGATGCTCCTAGAAGGATCTGGATCCCTAATGGTAGTGACAGTGGAGAGTGGGTCAGTCCTGAAAAGTGTGTTATTTATGACAAGGATGGTCTCTTCAGTTCACAGTTTAATGTTTTAGAGAAACACTATATGCCAGAATTATTCACCTTTTTCTCCAGAGTTATGCAAGTTAAGTCCAATCCTTCTGTTGATGACTACTGCGAACTTTGGAATAACTGGGAAAATTCAAGGGAGCGATTGTCACATTCAGAGTGTTGTGCTTTCTGGGCCCATGTTTCAAATCACTGGAGTAAAAAGACACAGAAAACTCTTGCTGAAAACTTGTCAAAACTGCCAGTTGAATCGGACTCAGATGGAATCATGTTATTTGACAAACATGATGTTTACATCGCAGATGACCTCCAGCTGAAGTATCTTTTCGAACAATCTTCCCCTCATTCAATTTTTGTCTGGTATCCCCAGCCAAGCATCCCTTCCTTGTCCTGGACTAAGCTATTTGAGATCTACAGAAAAATTGGTGTTCGAACTATCTCTGAATCTGTACAGAAAGAGGATATCTCCAAGTTGGAAGCTAGTGAACTCAAGCAAGTGTCTCAGAAGGAATCTTTAATCGGAAGAGGCCTGCTGAGACTCATTCTTGGCTTTCTCGCTGATCCTTCTATTGAAATGGAAGCAGGACAAAGGCAGGAAGTTGTCAAAGGCCTTCTCAATCTTGAGGTCTTTCAGACGGAGGATCCAATTGCAGTAAGCTATAGACTGTCAACGACTTCCGGGGAAACCATGGACATTAATGCAAGACGAATGATGTGCTGGGACCAGGAGAATTTCAAGCTTATCATGGAGAAGATGGAGATGTCAGGTGGACATAAAAGTACAATTGAATATGCTACAATCTTCGCTGAAGTAATATCTGAAGCTGTGTTACAGGGGAATGGAGACCATATATCCGCTCTTGCCAAACTGATCAAGTTAGCATTCCTCCTGGATTTTGACGAGGAAGCAGTTGGGTTCTTGATGAGATCCAAGAATCTCCAAGTTTTCATGGAGGACGAGGAGTTTCTCTCTTCAGCTTTTTCTGTCGAGGGTCGACCAGGTCTTTAA 5154 0.4172 MATPKEHIEEIRRTKFSIGGELNPLTEDLHQAVKNLSAELYAKDVHFLMELIQNAEDNEYGEGVNPSLELVITSQDITDTGAPATLLIFNNEKGFSAKNIESICSVGRSTKKSNRKQGYIGEKGIGFKSVFLITAQPYIFSNGYQIRFNEEPCSHSNLGYIVPEWVEQNPSLADIKQIYGSHAVLPTTTIILPLKPDKIKPVKQQLSSIQPEVLLFLSKIKQFSVKEDNKDPRLNTVNAISISSEINFVTRKNIDADSYTLHLSTDEASDVTEKECSYYMWRQKFPVRQENQVERRLGVEEWVIKLAFPIGQRLNRGMSSPGIYAFLPTEMVTNFPFIIQADFVLASSRETILLDNKWNQGILDCVPSAFLNAFISLVTTSEDVPVSTLTPMFKFLPINSSSYPKLNVVRESIKAKLLTENIIPCESYSDQKIFRKPCEVGRLMPSFWNILKKARKQGVSLHSLSSHGRYILNSSFDTEEHDHILNFLGVEPVNSEWYAKCIMSSKLVLGVTEDDYLELLLFIAEKWSFSFYSTTMKYVPLLKYVGLDGRVALCAISNVTMRDGESMICMSHEPRHISWMIDWNREFGFMTDRYFMPRSTQAAIMSFFRRETLLEWLKIQVKVRVVGMYNFAVILYNSLNDDRQLAIAYAHFLYHSFSKSYLPKEKVDYLCGIMPLVDNYGHVMRRRKGVLVPANGSKWVGLMGANPWREEGYVELGEDYLRSGNYAGSFTPESQLITFLKTHIAVSDIPDISPPNAELSVADTPLTKKNAFLLLDWIHNLNYKENLPAKFLASIRTGSWLKISLSDSPGYRPPSQSFLFASSDGNLLQDESVMVDIPLIDQEFYGNGLNNYKEELKKIGVMFEYRDMCQFAGKHVMSLATSSALTKSNVFQILNFIKFLRLKVLPADEFIQTIKDGRWLKTSCGHRSPVGSVLFDQEWKAASQISDIPFIDQDHYGKEILRFKMELQLLGVVVGFNKNYQLVTDHLKSQACSNHPTAEAILLIFECMRDCERNSRPADKLIQALKGNKCLKTNMGYKFPSECFLFNTEWGCLLKVFHNDFPLIDEDFYGTTIFSYKRELGQAGVVVDFEAATQKFSPVFKKRASSSSIGREHVLSFLASYRQINKTNNKFPSDFVCSIYEAKWLQTRFGDPRSPRECILFGPEWEPVSSITLLPFIDDSDNSYGKGIHEYRKELNSLGVTIKYRDGVRFVAAGICFPQDPSTITPESVLSLLQCIKILQKYDPHLPDIFRKKVSQSWLKTYYGYRSPDQSLLFGSEWGSFLQRNDGPFIDEEFYGPNITAYKNELREIGVTVDVSNGCSLLAGYLDFHSEFSTIVRVYNYLNKHSWSPHRDAPRRIWIPNGSDSGEWVSPEKCVIYDKDGLFSSQFNVLEKHYMPELFTFFSRVMQVKSNPSVDDYCELWNNWENSRERLSHSECCAFWAHVSNHWSKKTQKTLAENLSKLPVESDSDGIMLFDKHDVYIADDLQLKYLFEQSSPHSIFVWYPQPSIPSLSWTKLFEIYRKIGVRTISESVQKEDISKLEASELKQVSQKESLIGRGLLRLILGFLADPSIEMEAGQRQEVVKGLLNLEVFQTEDPIAVSYRLSTTSGETMDINARRMMCWDQENFKLIMEKMEMSGGHKSTIEYATIFAEVISEAVLQGNGDHISALAKLIKLAFLLDFDEEAVGFLMRSKNLQVFMEDEEFLSSAFSVEGRPGL* 1718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0058 1717 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 28 201 IPR036890 -
Vvi17g0058 1717 Gene3D - 19 220 IPR036890 -
Vvi17g0058 1717 PANTHER WU:FJ29H11 2 1704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0058 Vvi-Chr17 493210 501940 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0058 - - vvi:100257713 3460.23