Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0036 ATGGGACTCAAGTGGGCGGTTTTTTGGGCGGCAGATGGGATGGTGTACGGGGATGGCTTGTGGAGGAAGACTCAAAACAGGGGAAGGAAGCTAAATAAGGGAAGAAGAAGAAAGAAGGAAAGGGGGGGTCCTTCAGCTTGGGGAGGCGTTCGACAGGGGAGGAGAAACGCAGCAATCTCCTTGCGGATTTCAACTGGAGAGGAGTCTTTCAAGAAAACTTTTCGCTTCCCGTGGCTCGCCGATAATCTGATGTCTGAACATAGTTCATCAGATGGATCCGAGAGGGCGCGGAACGTGAACTGGTTTCCGGTGGCTGTCGCGGCTGCCGAGGATGTGGACGACGGAGGAGTGCTGTCGTCTCCGAACAGCACAGTCTCATTTTTTCAGATAGTTCTTGAAATATTAATGCAATAA 414 0.5145 MGLKWAVFWAADGMVYGDGLWRKTQNRGRKLNKGRRRKKERGGPSAWGGVRQGRRNAAISLRISTGEESFKKTFRFPWLADNLMSEHSSSDGSERARNVNWFPVAVAAAEDVDDGGVLSSPNSTVSFFQIVLEILMQ* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0036 137 MobiDBLite consensus disorder prediction 27 50 - -
Vvi17g0036 137 Pfam HD-ZIP protein N terminus 71 126 IPR006712 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0036 Vvi-Chr17 281813 282633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0036 K09338 - vvi:100265773 85.1149