Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0035 ATGGATCGGAGGAGAACGGGGAGTCCGGTGTATGGGCGGCAGTGGAGTGGAGGGTCGAGTAGCACGGGGTCGTCTTCTCCGGCGATGTCGCCGGCGCACCCTCACTCGCGTCTGGCGTCGGGGGCCGGTGGAGTGTCCACCATCAAGAGGAGTCAAAATGTTGCGGCAAAAGCTGCGGCACAGCGTCTGGCGCAGGTGATGGCGTCGCAGACGGCTGACGACGACGACGACGACGATGATCTAGGGTTTCGGTACAGTGCTCCGCCGCCTCCTGCTCCGTCGTCTTATGCCAGCAGTATTAATAGTAACCATTCGATTTCGTCCGCTAGAGCCACTAGATCTCCGTCACCTGCATTAGGTCGGAACTTTGTGGAGCATACTCCTTCAGTTCGATCCACATCAGCTGGAAGGCCAGCAATGTCCGTTCGTGCAATGCCAATAGTGCCATCTAGCAGAGCAACACTTAGAAATCCCGTTTCTATACCTCCTATGGAACCTCCTGCCAAAAATAGGCCCAGAGAAAAAAGGTCTACATTAGATTTGGGGCATATTAACTTAAAAGGCGCAGAAAATCAGCATGAGGCATCTGCACTTCATGATGAGCTTGATATGCTCCAAGAAGAGAATGAGAATATTCGTGAAAAGCTTCGACTTGCAGAAGAAAGGCGTGAAGAAGCAGAGGCTAGATCTAGGGAGCTTGAGAAACAGGTTGCTGCTCTTGGTGAAGGTGTATCCCTAGAAGCAAAGTTGTTGAGCAGGAAGGAAGCAGCATTGCGTCAAAAAGAGGCTGCTCTAAAGGCGGCAAAACAAACCAAGGATGGGAGAGATGAGGAAATTGCAAACCTTCGTTTGGAAATACAGAACTTGAAAGATGGTGCCACAACTGCTATAGAACAACTTCAAGAAGCAGAATCTGAAGCAAAAGCTCTTCGCTCCATGACAAAAAGAATGATTTTGACTCAGGAGGAGATGGAAGAAGTTGTTCTGAAGAGATGTTGGCTTGCTCGATACTGGGGTTTAGCCGTACATCATGCCATCTGTGCAGACATAGCATTATCAAAGCATGAGCATTGGTCATCTTTAGCACCTTTGCCATTTGAAGTCGTCATTTCAGCTGGACAAAAGGCCAAGGAAGAGTCTTGGAATGGAGGTGGTGAGGATCCAGATAGGAGTAAACTTGTCCGAGATTTGAGTGATCTAACCGGAGAAGGAAATATCGAGAGCATGCTTTCAGTTGAAATGGGTTTGAGGGAGCTAGCTTCCTTAAAGGTTGAGGATGCCATTGTCCTTGCATTGGCCCTGCACAGACGTCCAAATTTGGTTCGACAGTACAGCTCAGATAAATCACCGGGTGATCCCAAGTCCATGGAGTCATTTGAATTAAATCAAGAGGAGGCAGAAGATGTTCTCTTCAAAGAGGCTTGGCTTACTTATTTCTGGAGAAGAGCCAAAGTCCATGGTGTAGAAGAGGATATTGCAGAAGAGAGACTACAATTTTGGATCAGTCGGAGTGGGCAAACACCAACTTCACATGACGCTGTTGATGTTGAGCGAGGCCTGAGGGAGCTGAGGAAACTAGGGATAGAGCAACAACTCTGGGAAGCATCTCGCAAGGAAAACGACCAGCCTTCTTACGCCTCAATTGTTAATCACAAGCCTTCTTATGTTTCAATTGTTAATCAGAAGCCCGTTGCAGAATCAGACTACACTCCATGA 1716 0.4831 MDRRRTGSPVYGRQWSGGSSSTGSSSPAMSPAHPHSRLASGAGGVSTIKRSQNVAAKAAAQRLAQVMASQTADDDDDDDDLGFRYSAPPPPAPSSYASSINSNHSISSARATRSPSPALGRNFVEHTPSVRSTSAGRPAMSVRAMPIVPSSRATLRNPVSIPPMEPPAKNRPREKRSTLDLGHINLKGAENQHEASALHDELDMLQEENENIREKLRLAEERREEAEARSRELEKQVAALGEGVSLEAKLLSRKEAALRQKEAALKAAKQTKDGRDEEIANLRLEIQNLKDGATTAIEQLQEAESEAKALRSMTKRMILTQEEMEEVVLKRCWLARYWGLAVHHAICADIALSKHEHWSSLAPLPFEVVISAGQKAKEESWNGGGEDPDRSKLVRDLSDLTGEGNIESMLSVEMGLRELASLKVEDAIVLALALHRRPNLVRQYSSDKSPGDPKSMESFELNQEEAEDVLFKEAWLTYFWRRAKVHGVEEDIAEERLQFWISRSGQTPTSHDAVDVERGLRELRKLGIEQQLWEASRKENDQPSYASIVNHKPSYVSIVNQKPVAESDYTP* 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0035 571 Coils Coil 195 243 - -
Vvi17g0035 571 MobiDBLite consensus disorder prediction 1 138 - -
Vvi17g0035 571 PANTHER FAS-BINDING FACTOR-LIKE PROTEIN 1 547 IPR040321 GO:0000911
Vvi17g0035 571 MobiDBLite consensus disorder prediction 154 176 - -
Vvi17g0035 571 MobiDBLite consensus disorder prediction 12 31 - -
Vvi17g0035 571 Coils Coil 251 313 - -
Vvi17g0035 571 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0035 Vvi-Chr17 267072 275610 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vvi17g0035 1 537 EF-hand Containing Proteins AT5G13260 58.696 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0035 - - vvi:100256039 1021.92