Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0025 ATGGCGCTGTCTCCGACTTTCTCACCCCCTGTTTGTTTCAAGAAAAACACTACGTTCTCTCCAAACACCCCCAAATTCCACAAACCCACTACCAAGACCCCAACCCAAACCCTCTCCGCTATTCCCCCAATCTCCACCGCGGCCGACCTCTCCGCTGTGGCCGTGCCATTTGATGGAACCACTCTTGCAGTCATCGGAGGCGGCTCGGTGGCCGCCCTCGCCGCGGTTCTGTCGCTCACTGACCCGGAGAGGCGGCGGCAGCTGCAGGCGGAGGAGGTGGGAGGCGGGGACAAGGAGGTTGTGAAGGAGTATTTCAACAACTCGGGGTTTCAGAGGTGGAAGAAGATCTATGGAGAAACCGACGATGTGAACAAGGTTCAGCTGGATATTCGGCTAGGCCACTCCAAGACTGTGGAGAATGTGATGAAGATGTTGACGGACGAAAGGTCGCTCGAAGGGGTTACTGTATGTGACGCTGGGTGTGGCACGGGCTGTCTCTCTATTCCTTTGGCCAAACAGGGTGCCATTGTGACGGCCAGTGATATCTCTGCTGCCATGGTTGCTGAAGCTGAGAAACAGGCTAGGGAAGAGCTTCTTAGTGGGAGGGATGATGGCCTGCCAGCACCAGTGATGCCAAAATTTGAAGTGAAGGATTTAGAAAGTTTGGATGGGAAATACCACACAGTTGTTTGCCTGGATGTTTTGATTCATTATCCACAGAGTAAGGCTGATGGGATGATCGCACACCTTGCTTCCTTGGCTGAGAAGCGGCTAATTCTAAGCTTTGCACCCAAGACATTCTATTATGATCTGTTGAAGAGGGTAGGCGAGTTGTTCCCAGGGCCTTCAAAGGCAACGAGGGCTTATCTCCATGCTGAGGCAGACGTGGAGAGGGCGTTGCAGAAGGTGGGTTGGAGGATAAGGAAGAGAGGCCTAATCACTACACAGTTTTACTTTGCAAAGCTAGTTGAGGCTGTCCCTGCTTAG 987 0.5299 MALSPTFSPPVCFKKNTTFSPNTPKFHKPTTKTPTQTLSAIPPISTAADLSAVAVPFDGTTLAVIGGGSVAALAAVLSLTDPERRRQLQAEEVGGGDKEVVKEYFNNSGFQRWKKIYGETDDVNKVQLDIRLGHSKTVENVMKMLTDERSLEGVTVCDAGCGTGCLSIPLAKQGAIVTASDISAAMVAEAEKQAREELLSGRDDGLPAPVMPKFEVKDLESLDGKYHTVVCLDVLIHYPQSKADGMIAHLASLAEKRLILSFAPKTFYYDLLKRVGELFPGPSKATRAYLHAEADVERALQKVGWRIRKRGLITTQFYFAKLVEAVPA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0025 328 PANTHER METHYLTRANSFERASE 103 251 - -
Vvi17g0025 328 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 92 310 IPR029063 -
Vvi17g0025 328 ProSiteProfiles Magnesium protoporphyrin IX methyltransferase (EC 2.1.1.11) family profile. 1 327 IPR010251 GO:0015995|GO:0046406
Vvi17g0025 328 CDD AdoMet_MTases 155 262 - -
Vvi17g0025 328 NCBIfam magnesium protoporphyrin IX methyltransferase 97 324 IPR010251 GO:0015995|GO:0046406
Vvi17g0025 328 Pfam Magnesium-protoporphyrin IX methyltransferase C-terminus 231 326 IPR010940 GO:0015995|GO:0046406
Vvi17g0025 328 Gene3D Vaccinia Virus protein VP39 94 328 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0025 Vvi-Chr17 181612 183364 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0025 K03428 - vvi:100243913 613.994