Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vvi17g0023 | ATGGAAGAAGCGAGAAGCGAATTGGAGAGAGAAGAAGATGAAGAGGCTACCGAGCTTCTAAGGGACCGATTCCGACTCTCCACCATCTCAATTGTGGAAGCTCAAGCGAAGAAAAGCGATATGGAAATCTCGGAGCCGATTGTGGCCTGCATTTCCGATTTGGCCTTCAAGTATACAGAACAGTTGGCAAAGGACCTTGAGTTATTTTCTCAGCATGCGGGTCGTAAGACTGTCAACATGGAAGATGTCATCCTCTCTGCACATAGAAACAAACATTTAGCCTCCTCCTTGAGGTCCTTCTGCAATGATCTCAAAGCAAAAGAAATCCCATCTGAGAGGAAGCGGAAGAAAGCATCAAGAAAGGAGGACAAAGCTTCCACCAGCGTGGTCCATATTCCAGATCTCTAA | 408 | 0.4632 | MEEARSELEREEDEEATELLRDRFRLSTISIVEAQAKKSDMEISEPIVACISDLAFKYTEQLAKDLELFSQHAGRKTVNMEDVILSAHRNKHLASSLRSFCNDLKAKEIPSERKRKKASRKEDKASTSVVHIPDL* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vvi17g0023 | 135 | Gene3D | Histone, subunit A | 1 | 119 | IPR009072 | GO:0046982 | |
| Vvi17g0023 | 135 | FunFam | Protein MHF1-like isoform A | 1 | 118 | - | - | |
| Vvi17g0023 | 135 | Coils | Coil | 1 | 21 | - | - | |
| Vvi17g0023 | 135 | Pfam | CENP-S protein | 20 | 93 | IPR029003 | GO:0071821 | |
| Vvi17g0023 | 135 | PANTHER | CORTISTATIN | 7 | 130 | - | - | |
| Vvi17g0023 | 135 | SUPERFAMILY | Histone-fold | 35 | 92 | IPR009072 | GO:0046982 | |
| Vvi17g0023 | 135 | MobiDBLite | consensus disorder prediction | 110 | 135 | - | - | |
| Vvi17g0023 | 135 | MobiDBLite | consensus disorder prediction | 110 | 129 | - | - |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vvi17g0023 | K11511 | - | vvi:100257797 | 231.876 |