Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0011 ATGATAAACGGCTCGTCTCGCTGTGACCTTCTCTTGAATTCTCAAAACTTTTGTCGCTCCATCCCCGTAGGGGCAGAGAACCCGTCGCCAGATACTATTCTCAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCATCCTCTGTAGCTCAGGTAGTGACTACTTTCCAGGAAAGGGGAGCGATGGAATACACTATTGTGGTAGCTGAAACGGCGGACTCGCCTGCTACATTACAATACCTTGCCCCTTATACAGGAGCAGCTCTGGCTGAATATTTTGTGTACCATAAACGACACACTTTAAATTCGATCCATAACATCTATGTCAGCTTTTCTGCCTAA 360 0.4417 MINGSSRCDLLLNSQNFCRSIPVGAENPSPDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAETADSPATLQYLAPYTGAALAEYFVYHKRHTLNSIHNIYVSFSA* 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0011 119 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 31 107 IPR005294 GO:0015986|GO:0045261|GO:0046933
Vvi17g0011 119 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 113 IPR027417 -
Vvi17g0011 119 Gene3D - 25 115 - -
Vvi17g0011 119 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 31 107 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi17g0011 Vvi-Chr17 64743 65102 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0011 K02111 - vvi:109124299 239.58