Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0010 ATGGCTGAGGAAGAACAAGAAATTAAAAGGACATCTCATTCAGAGGAAGGAGAGTCTGAAGGCAATGATGAAAAGGGGAGAATTCGGAAAAATAAACTAAAGAAGCGGCTGTTGAAGGAAGCTTCTAAGGCTGATAAGCGTGGGGTTTGCTACTTGAGTCGGATTCCCCCTCACATGGATCATGTGAAGCTTCGTCATATACTTTCCCAGTATGGAGAAATCCAAAGGATTTATCTTGCTCCAGAAGACCCTGCAACTCAAGTACATCGCAAACGGGCTGGTGGGTTTCGAGGACAAGTATTTTCAGAAGGGTGGGTTGAATTTACCAAGAAAACTGTTGCTAAGAGGGTGGCCAAGATGTTAAATGGTGAACAAATAGGTGGGAGGAAGAGATCATCATTCTATTATGACCTTTGGAATATCAAGTACTTGAGCAAATTCAAGTGGGACGATCTTACAGAAGAGATTGCTTACAAGAATGCCATTCGAGAGCAGAAACTAGCTTTGGAACTTTCTGCTGCTAAGCGGGAGCGTGACTTCTACCTCTCTAAAGTTGACAAGTCTCGTGCCTTGAGTTCTATAGAAGAACGACTAAAGAAGAAGCAAAAGGTCCAACAAGATGCAGGAACAAACACTGAGGCCCCTGCTAATGATCAAGGACCAAAGGTGATCCGCCAATTCCCCCAGAAACCACCACTTGCAGATAAAGCAGCAGAAAGCAAGCCGAGACTCTCCAAAGACATCCTAGCAGGGGTGTTTGGGGGTTCGTCATGA 774 0.447 MAEEEQEIKRTSHSEEGESEGNDEKGRIRKNKLKKRLLKEASKADKRGVCYLSRIPPHMDHVKLRHILSQYGEIQRIYLAPEDPATQVHRKRAGGFRGQVFSEGWVEFTKKTVAKRVAKMLNGEQIGGRKRSSFYYDLWNIKYLSKFKWDDLTEEIAYKNAIREQKLALELSAAKRERDFYLSKVDKSRALSSIEERLKKKQKVQQDAGTNTEAPANDQGPKVIRQFPQKPPLADKAAESKPRLSKDILAGVFGGSS* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0010 257 PANTHER ACTIVATOR OF BASAL TRANSCRIPTION 1 4 253 IPR039119 -
Vvi17g0010 257 CDD RRM_ABT1_like 48 145 IPR034353 -
Vvi17g0010 257 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 48 130 IPR000504 GO:0003723
Vvi17g0010 257 MobiDBLite consensus disorder prediction 201 242 - -
Vvi17g0010 257 FunFam Pre-rRNA-processing protein ESF2 1 133 - -
Vvi17g0010 257 SUPERFAMILY RNA-binding domain, RBD 42 130 IPR035979 GO:0003676
Vvi17g0010 257 MobiDBLite consensus disorder prediction 1 28 - -
Vvi17g0010 257 MobiDBLite consensus disorder prediction 1 35 - -
Vvi17g0010 257 Gene3D - 1 133 IPR012677 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0010 K14785 - vvi:100259435 498.819