Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0008 ATGTTTGCAGCTGAGATTTTTATGCATCGATTCCTCTTATCTAGTCCTGTTAGAACCCTCAATCCTGAGGAAGCAGATTGGTTTTATACCCCTGTTTACACCACATGTGATCTGACTCCAAATGGCCTCCCTTTGCCTTTCAAATCACCGCGGATGATGAGAAGTGCAATACAGCTTATCTCTTCAAACTGGCCTTATTGGAATCGGACAGAAGGGGCTGATCACTTTTTTGTAGTGCCCCATGACTTTGGGGCGTGCTTCCATTACCAAGAAGAGAAAGCTATTGAAAGAGGAATTCTTCACTTGCTCCAGCGTGCCACCTTGGTTCAAACTTTTGGACAACGGAATCATGTTTGCTTGAAAGAAGGCTCAATCACAATCCCTCCATATGCTCCTCCACAGAAAATGCAGTCCCACTTGATCCCGCCAGACACTCCTAGGTCTATCTTTGTCTACTTCCGAGGATTGTTCTATGATGTAGGAAATGACCCAGAAGGTGGTTATTATGCAAGAGGCGCACGGGCAGCTGTGTGGGAGAATTTTAAAGACAATCCACTTTTTGACATCTCAACAGAGCACCCAATGACTTATTATGAGGACATGCAACGGGCTGTGTTTTGTTTGTGCCCCCTAGGATGGGCCCCATGGAGTCCAAGATTAGTTGAAGGAGTGATATTTGGGTGCATCCCTGTCATCATCGCAGATGACATTGTTTTACCCTTTGCTGATGCAATTCCGTGGGAAGAAATTGGGGTGTTTGTAGCTGAGGAAGATGTTCCCAACTTGGACACAATTCTCACATCAATCCCACCTGAGGTAATATTGAGGAAGCAGAGATTACTTGCCAACCCTTCAATGAAGCAGGCAATGTTGTTCCCACAACCTGCTCAACCAGGGGATGCTTTCCATCAAATTTTGAATGGACTTGCACGGAAGTTGCCACATGGCAGGAACATTTACCTGAAGCCAGGTGAGAAGATCTTAAACTGGACTGCAGGCCCAGTGGGTGACCTGAAACCTTGGTAG 1026 0.46 MFAAEIFMHRFLLSSPVRTLNPEEADWFYTPVYTTCDLTPNGLPLPFKSPRMMRSAIQLISSNWPYWNRTEGADHFFVVPHDFGACFHYQEEKAIERGILHLLQRATLVQTFGQRNHVCLKEGSITIPPYAPPQKMQSHLIPPDTPRSIFVYFRGLFYDVGNDPEGGYYARGARAAVWENFKDNPLFDISTEHPMTYYEDMQRAVFCLCPLGWAPWSPRLVEGVIFGCIPVIIADDIVLPFADAIPWEEIGVFVAEEDVPNLDTILTSIPPEVILRKQRLLANPSMKQAMLFPQPAQPGDAFHQILNGLARKLPHGRNIYLKPGEKILNWTAGPVGDLKPW* 342
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0008 341 Pfam Exostosin family 2 269 IPR040911 -
Vvi17g0008 341 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 2 308 IPR004263 GO:0006486|GO:0016757
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vvi17g0008 Vvi-Chr17 47749 49339 Wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0008 K20870 - vvi:100242415 719.539