Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0007 ATGGACAGGGCTTGTGTGGGGAGTATGAAAGCCACGCTTCCACACATTTCTAATACTAATACAATTTCACTGTATCCATATTCTACATCCACTTTCTTATCTACTCATCTCTTCTTCCCCTTCTCACAGACACAGTACGGAGAAGTAGGAAGAGAAAAAGGAGAGAGAATGGCCCTGCCTTCACCCACAAGGCTTGAGGCTACCAAGTCCTGTCCATTAGCCCCCACAGGCAATGTTGGCCTGCGACGTCCTATGGACCGTTTTGCTTTGAGATCCTCCTTCTTTTCTCCCTCTATTCACCTCTTGTTGCCCCCTAATCAACACCGTGCTCTCCCTTCTACTGCGCCTAAAATCTCCATGCGTGTGGCCTCCAAGCAAGCCTATATCTGCCGTGACTGCGGATATATTTACAACGACAGAACTCCATTTGAGAAACTACCTGATGGATACTTCTGTCCAGTTTGTGGTGCTCCAAAGCGAAGATTTAGGCCATATCAGCCTGCTGTGGCAAAAAATGCTAATGACATGGATGTTCGGAAGGCACGGAAAACACAGATCCAGAAAGATGAAGCAATTGGGCGAGCATTACCTATTGCTATTGTGGTTGGAATTGCAGCACTTGCTGGTTTATACTTTTACCTCAACAGCACTGTCTAG 657 0.4658 MDRACVGSMKATLPHISNTNTISLYPYSTSTFLSTHLFFPFSQTQYGEVGREKGERMALPSPTRLEATKSCPLAPTGNVGLRRPMDRFALRSSFFSPSIHLLLPPNQHRALPSTAPKISMRVASKQAYICRDCGYIYNDRTPFEKLPDGYFCPVCGAPKRRFRPYQPAVAKNANDMDVRKARKTQIQKDEAIGRALPIAIVVGIAALAGLYFYLNSTV* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0007 218 ProSiteProfiles Rubredoxin-like domain profile. 125 165 IPR024934 GO:0005506
Vvi17g0007 218 PANTHER RUBREDOXIN-LIKE SUPERFAMILY PROTEIN 69 217 - -
Vvi17g0007 218 Pfam Rubredoxin 128 162 IPR024935 GO:0005506
Vvi17g0007 218 SUPERFAMILY Rubredoxin-like 125 170 - -
Vvi17g0007 218 Gene3D - 125 165 - -
Vvi17g0007 218 CDD rubredoxin 128 165 IPR024935 GO:0005506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0007 - - vvi:100259528 436.417