Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0006 ATGGGAACGGGGTCTGACTCAGAGTCGGAGGGTAACGGATGGGGCAGAGCAAGAGGAATTCTGGTGAAGGCGGCGGTGTTGATAGGAGGGGCTATTCTCCTTAAGAGACTCACCAAGTCTACCACTCGCTGGGATCATGCCCGCTTTGTTTCCCACTCCCTCTCCGGCGAAAAGTTCTCAATGGAGCAGGCTTCCAGAGACCCTGACAACTACTTCAATTTCAGAATGGTCACGTGCCCAGCAGCAGAGCTGGTGGATGGTTCCCGGGTCTTATATTTTGAGCAGGCATTTTGGAGAACTCCTTCCAAGCCCTTTCGGCAGAGATTTTATATGGTAAAGCCTTGTCCAAAAGAGATGAAATGTGATGTTGAGCTAAGTTCATATGCCATTAGAGATGTGGAGGAGTACAAGAACTTCTGTGATCGCTCCAAGGCCCAGCGCCCACTTCCTGAGGAAGTTATAGGGGACATTGCAGAGCATTTGACGACCATATATCTCAAACGCTGTGAACGTGGCAAACGCTGTTTATATGAAGGTTCAACTCCATCAGGGGGATTCCCTAATTCATGGAGTGGTGCAACCTACTGTACTTCAGAACTTGCAGTCTTGAAGAATAATGAGATTCATATCTGGGATAGGGGCTATGATGATGAAGGAAATCAAGTTTGGGGAGTGAAGGAGGGTCCTTACGAGTTCAAGCCGGCACCTGCCTCAAGTTCCAATGACATGTTTTCTCCTTTAAATTTTGCCCCCCCTCTGCCCATGGAGAAAAGAATAGATGGTTCATTTGTTTTACAAGAATGA 804 0.4776 MGTGSDSESEGNGWGRARGILVKAAVLIGGAILLKRLTKSTTRWDHARFVSHSLSGEKFSMEQASRDPDNYFNFRMVTCPAAELVDGSRVLYFEQAFWRTPSKPFRQRFYMVKPCPKEMKCDVELSSYAIRDVEEYKNFCDRSKAQRPLPEEVIGDIAEHLTTIYLKRCERGKRCLYEGSTPSGGFPNSWSGATYCTSELAVLKNNEIHIWDRGYDDEGNQVWGVKEGPYEFKPAPASSSNDMFSPLNFAPPLPMEKRIDGSFVLQE* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0006 267 CDD CpcT 54 235 IPR010404 GO:0016829|GO:0017009
Vvi17g0006 267 Pfam CpeT/CpcT family (DUF1001) 51 233 IPR010404 GO:0016829|GO:0017009
Vvi17g0006 267 Gene3D CpcT/CpeT domain 45 243 IPR038672 -
Vvi17g0006 267 PANTHER CHROMOPHORE LYASE CRL, CHLOROPLASTIC 1 267 IPR010404 GO:0016829|GO:0017009
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0006 - - vvi:100264699 559.681