Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi17g0001 ATGGCCCTCCTTCATTCAGCAAGAAACGAATCGAGGACAGTTGATCTTGTTACCTGTTTTGTATGGTGTTCAGTGACATCTCCCAAAAAAAACTTGAAAATGTGGTGCCAAGGTTGGTTGCGTTCCTTAGCAATACTACTATTGGCTGCATTAAGCCTAGAGCCTTCACAAGCTCTTATAGGGAAAGAAAAATCTGCTGTGTTTTTGTCACCTGAGTTTGTCCTAGGACCAGGATCGGTAGTGGACAGTTACTACCAAGATATAGACTTTCCAAGGGGTCACATTGCTCTCAAGAGTTTCAATGCTGAAGTGGTTGATGAGACAGGGTTGCCTGTTCCCCTTCAGGAAATTTATCTCCACCACTGGGTTATTGAAAGGTACTATCAGCGTAAAGGTGTGGAGGCTCCTGGATCCAGTTCCATAAAGGAGACCCACAATCCAGATTTCATAACTGTAAGGAACAGTGGAATATGTCAAGATAATGTTCTTGCACAGTATTTTGGCCTTGGATCTGAAACGCGAAAAACAGCCACACATGTGCCAGACCCTTATGGAATAGAAATTGGTAATCCAGTGGAAATTCCTGATGGGTACGAGGAGAAATGGTTGCTTAATGTTCATGCAATTGACACTCGGGGTGTGGAAGACAGGTTGGGATGCGCTGAATGTAGGTGTGATCTTTATAATGTTACAGAGGATGGACACGGTTATCCTTTGAGTTCAGACTATAAGGGAGGCTTGAGATGCTGCTATGATAAGACACAATGCAGAGTAAAAGAAGGTTTTGAAGGCATCAGGAGAAGCCTCTATATGAAATATACAGTGAAGTGGGTAGATTGGGACAGCTCTGTTGTGCCAGTTAAAATTTATATATTTGATGTCACTGATAATTGGAAAAGTTCGAATGCTTCAACAGTTCATAGAGCAAGGCATAATTGCCGGGTGGAGTATGATGTAGGGTCTTGCAGCATCACTGGTGAAACTGAGGATGGTTGCGTTGATGTAAAAAGGACAAGTTTGACTATGCCAACTGGTGGTCATGTCATCTATGGTGTTTCCCATCAGCATTCAGGAGGGATTGGTTCTACTCTTTACGGAGAGGATGGAAGAATTATTTGCTCTTCAATACCAACTTATGGGGAAGGGAAGGAAGCAGGAAATGAAGCTGGTTACATTGTTGGAATGTCTACCTGTTATCCTCAACCAGGCTCTGTCAAGATATCTGATGGAGAGACATTGATTCTGGAATCTAATTACAGTAGCACCCAGAAGCACACAGGAGTTATGGGGCTCTTCTACATTTTGGTTGCAGAGCCATCACCAAATCCATCGCTTCTCTTACATTCTCCATTTGATATGCATGCAAACAGCAAAGTATATAATTCTGTTTCGGCAGTAGCTTTGCTGGGGTTGGCAATAGCTGCTGCTATTGTTGTGGTTTATCGTCGAAGGAAGGAAACAGAATATGGCTATGAAGCTCTTGTCGTGTGA 1491 0.4292 MALLHSARNESRTVDLVTCFVWCSVTSPKKNLKMWCQGWLRSLAILLLAALSLEPSQALIGKEKSAVFLSPEFVLGPGSVVDSYYQDIDFPRGHIALKSFNAEVVDETGLPVPLQEIYLHHWVIERYYQRKGVEAPGSSSIKETHNPDFITVRNSGICQDNVLAQYFGLGSETRKTATHVPDPYGIEIGNPVEIPDGYEEKWLLNVHAIDTRGVEDRLGCAECRCDLYNVTEDGHGYPLSSDYKGGLRCCYDKTQCRVKEGFEGIRRSLYMKYTVKWVDWDSSVVPVKIYIFDVTDNWKSSNASTVHRARHNCRVEYDVGSCSITGETEDGCVDVKRTSLTMPTGGHVIYGVSHQHSGGIGSTLYGEDGRIICSSIPTYGEGKEAGNEAGYIVGMSTCYPQPGSVKISDGETLILESNYSSTQKHTGVMGLFYILVAEPSPNPSLLLHSPFDMHANSKVYNSVSAVALLGLAIAAAIVVVYRRRKETEYGYEALVV* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi17g0001 496 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 37 439 IPR011692 -
Vvi17g0001 496 Pfam Stress up-regulated Nod 19 62 438 IPR011692 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi17g0001 - - vvi:100243857 916.761