Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1347 ATGTTTCAACCGCACAACCAGCTTTCAATTCAAACAAAGCCATTAGCTATTCAAGAGCCATCAGCATTGATGCATGTGGATCCAAATAATTCTTTTGGAGCTGCAAGAGATGAGATGCACAATGGAGGGCTTTCTAAGGCAGAATCTGCTGTCAACAATTCCAAGAAACTTCAGGATGAGCTACAAACTCTGGGGTTCAAAATCAAACAGCATGAGGATAATATAAAATATCTGAAGACTCAAAAGGATAATCTGGATGGCTCCATTCTTGACTTGCAAGTTACCCTTGGCAAGTATTGTTCATCTAGTATACCAACCATGGAAAATGAGGCCCTTTCGAAGTCCCGAAGTGAAAATGAAACTGTTGAACAGATACTGAAGTATGAAAAATCAGCAGCTGCCATCTTATGCCAGCTGAAAATTCGTCATGGAAGTCAGGCTTCACATCTTACATTGGCTAAGGATGTGCTCGGTATTGTTGCCACACTTGGAAAAGTAGATGATGAAAACCTTAGTAGGCTTTTCTCGGAGTACTTAGGACTGGAGACTATGATGGCAATTGTCTGCAAGACTTATGAAGGCGTTAAAACTTTGGAAACATATGACTTTGAAGGTGGCATAAACAAACATTCTGGTCTGCATGGGCTTGGATCTTCTATCGGAAGACATTTGGATGGCCGATTTCGCATCATCTGTCTTGAACATTTAAGACCATATGCTGGGGATTTTGTTGCTGATGACACACAAAGGAGGCTTGATCTTCTAAAGCCAAGATTACCCAACGGAGAGTGTCCACCTGGCTTTCTTGGCTTTGCAGTGAATATGATCAATGTGGATAGTGCAAACATACTTTGTTTAACATCCAGTGGTTGTGGCCTCAGAGAGACTCTATTCTATAATCTATTCTCTCGTCTTCAAGTGTATAGAACAAGAGCAGAAATGTTACTTGCTCTTCCTTGTATTACCGATGGGGCACTTTCTTTAGATGGTGGAATGATCAAAACTGCAGGTGTATTTTCTTTGGGCAGTCGGGAAGATGTAGAAGTGAGATTCCCAAAAAGCTCTGGATCAAATCTTCCTCTGGAGTACTTTGAAACTGAGAAGGAGCTGACAGAGGTGAACTGGAAAAGGGAAAAGGTTGAGGAAGATATTCAGAGAGAACAATCACTTCTGAACCATATAAATTACACCTTCAGAATCAAGAAGCAGGCATTCATCAAGTACCTGGCTGATAGCTCACCATATGGGATTCAGCAACAAATTCCAGGAGAGCGGGAGAGACTGACCCAAAGATGA 1296 0.4159 MFQPHNQLSIQTKPLAIQEPSALMHVDPNNSFGAARDEMHNGGLSKAESAVNNSKKLQDELQTLGFKIKQHEDNIKYLKTQKDNLDGSILDLQVTLGKYCSSSIPTMENEALSKSRSENETVEQILKYEKSAAAILCQLKIRHGSQASHLTLAKDVLGIVATLGKVDDENLSRLFSEYLGLETMMAIVCKTYEGVKTLETYDFEGGINKHSGLHGLGSSIGRHLDGRFRIICLEHLRPYAGDFVADDTQRRLDLLKPRLPNGECPPGFLGFAVNMINVDSANILCLTSSGCGLRETLFYNLFSRLQVYRTRAEMLLALPCITDGALSLDGGMIKTAGVFSLGSREDVEVRFPKSSGSNLPLEYFETEKELTEVNWKREKVEEDIQREQSLLNHINYTFRIKKQAFIKYLADSSPYGIQQQIPGERERLTQR* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1347 431 Coils Coil 54 74 - -
Vvi16g1347 431 PANTHER EN/SPM-LIKE TRANSPOSON-RELATED 44 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vvi16g1347 Vvi-Chr16 21908012 21912497 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1347 - - vvi:100257134 844.343