Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vvi16g1345 ATGGAAGAAGAAGTTCCCCCCCAGAGGGGCAAAAAGAGGTCCATTGTGGAAATTTCTGGTGATAATGATCTAGGTGCCATCTACAAGTTTAAGATTCTCTTACCCAATGGCACAAGCTTGGGTTTGAACTTACATGAACATAAGTTGTCCAACCTTCTAATGCCTCTACAAGAGTTCATTGGTTTGGTGAGAACAGAGTACTTCAGAACTCGTCGCCAACCTGAATCGCCTGGAACGAGGCAAAAAATAATGTGGAAAAGTAAAGATATATTTCTTGTAGACGCATCTGAAAACAGGATGAAACATACTGTCAATTTCAGGAAATTTGAGCCACATAAATGTCATATTTTACAACTTAATGATGGGTCAGGTCAGAGTGCTGATACCTTTAAGAACATGTGGGATTTGACACCAGATACTGACCTATTAGCGGAACTTCCTGAAGAGTATGCATTTGAGACTGCTCTTGCGGATTTAATTGACAATTCACTGCAAGCAGTATGGTCTAATGGTATGAGTGAGAGGAGATTGATTAGTGTGGATATTGTCGAAGATAGGATTTCAATCTTTGACAGTGGTCCTGGAATGGATGGCAGTGATGAAAACTCTATTGTGAAGTGGGGAAAGATGGGTGCATCACTTCATAGGTCCTCCAAGGCACAGGCAATAGGGGGCAAGCCTCCATACCTAAAGGTAAAATTTAATTTTTGA 711 0.4093 MEEEVPPQRGKKRSIVEISGDNDLGAIYKFKILLPNGTSLGLNLHEHKLSNLLMPLQEFIGLVRTEYFRTRRQPESPGTRQKIMWKSKDIFLVDASENRMKHTVNFRKFEPHKCHILQLNDGSGQSADTFKNMWDLTPDTDLLAELPEEYAFETALADLIDNSLQAVWSNGMSERRLISVDIVEDRISIFDSGPGMDGSDENSIVKWGKMGASLHRSSKAQAIGGKPPYLKVKFNF* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vvi16g1345 236 Gene3D - 139 226 IPR036890 -
Vvi16g1345 236 PANTHER EN/SPM-LIKE TRANSPOSON-RELATED 121 208 - -
Vvi16g1345 236 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 149 211 IPR036890 -
Vvi16g1345 236 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 150 224 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vvi16g1345 K23113 - vvi:100252197 469.929